Shewanella mangrovisoli: K0H60_19100
Help
Entry
K0H60_19100 CDS
T09316
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K0H60_19100 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smay03021
]
K0H60_19100 (rpoZ)
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_19100 (rpoZ)
Enzymes [BR:
smay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K0H60_19100 (rpoZ)
Transcription machinery [BR:
smay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K0H60_19100 (rpoZ)
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K0H60_19100 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1599
Motif
Other DBs
NCBI-ProteinID:
QYK08877
LinkDB
All DBs
Position
4392055..4392333
Genome browser
AA seq
92 aa
AA seq
DB search
MARVTVEDAVEQIGNRFDMILVAARRARQIAVQGKDPMVEEMNDKPTVIALREIELGLVN
AHTLDADERQSVREREAAEIAAVAAIAEGRSL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaactgtagaagacgccgtagaacaaatcggcaaccgttttgatatgatc
ctggttgcggcgcgtcgtgctcgccaaatcgccgtgcagggtaaagaccctatggttgaa
gagatgaacgacaagccaacggttatcgccctgcgtgaaatcgaactaggtttagtgaat
gctcacactttagatgctgacgagcgtcaatcagtgcgtgagcgtgaagcagctgaaata
gcagctgttgccgccatcgctgaaggccgttcactataa
DBGET
integrated database retrieval system
