Shewanella mangrovisoli: K0H60_19135
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Entry
K0H60_19135 CDS
T09316
Name
(GenBank) response regulator transcription factor
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
smay
Shewanella mangrovisoli
Pathway
smay02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K0H60_19135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
smay02022
]
K0H60_19135
Two-component system [BR:
smay02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
K0H60_19135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_40
cREC_REC
HTH_24
HTH_29
PH0730-like_N
RMI2
Phage_terminase
HTH_10
HrcA_DNA-bdg
DUF1804
Motif
Other DBs
NCBI-ProteinID:
QYK08884
LinkDB
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Position
4399947..4400543
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AA seq
198 aa
AA seq
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MHILLAEDQAMVRGALAALLTLAGGFTITQASNGDEALSLLKQQHFDLLLTDIEMPGRTG
LELASWLKEQHSHTKVVVITTFGRAGYIKRAIEAGVGGFLLKDAPSETLVNAIQQVSAGK
RVIDPELAIMAIGDIDPLNDKERRALRFASEGKSTAEIAEMLFIAEGTVRNYLSEAIAKL
NASNRIDAARIAKQKGWL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcacattcttctcgcggaagatcaggccatggtacgcggcgcgctcgcagcactgtta
accctagcgggtggttttaccatcacccaagccagcaatggcgatgaagccttaagcctg
ctgaaacaacaacatttcgatctactcctgacggatatcgaaatgccagggcgcaccggc
ctggaattagcgtcttggttgaaagaacaacatagccataccaaggtcgtggttatcact
acctttggccgcgcaggttacatcaaacgcgccattgaagcgggcgtaggtggtttttta
ctgaaggatgcgccctcggaaaccttagtcaacgccatccaacaggtgagcgcgggtaag
cgggttatcgatcctgagctggcaatcatggcgattggcgatatcgatcccctcaatgat
aaagagcgccgcgccctacgttttgccagtgaaggcaaatccaccgccgagatagccgag
atgctgtttattgccgaaggcacggtacgtaactatctatccgaagccattgccaaactc
aatgcgagcaaccgaatcgatgccgcccgcatcgccaagcaaaaaggttggttatag
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