Shewanella mangrovisoli: K0H60_19630
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Entry
K0H60_19630 CDS
T09316
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smay02000
]
K0H60_19630
Transporters [BR:
smay02000
]
Other transporters
Pores ion channels [TC:
1
]
K0H60_19630
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF2490
MtrB_PioB
Porin_2
Motif
Other DBs
NCBI-ProteinID:
QYK08976
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Position
complement(4513029..4515020)
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AA seq
663 aa
AA seq
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MLLRRKKILAQLVSAALLLPATQVLADAAPDQDKMMERIVVTASGFEQQVRDAPASISVI
TREDLDTRFYRDLTDAMLEVPGVVVTGGADRRDISLRGMGSQYTLILVDGKRQSSRETRT
NSDGPGVEGAWTPPLAAIDRIEIVRGPMSSLYGSDAIGGVINIITRKVPNEWQGELRLDT
TLQEKSSSGNVYQGNFFVNGGLIKDLLGVQLYGQYTQREEDSIYGGYRGRDADNLTARFA
LTPNQDHDIMLEVGIANQELDSTLGKTVAPLAPGASCGRSGCPASSTTEYENSTISLSHT
GRWDFGTSDTYIKHEVFDNKSRKMKIKNTDAQTSLIATLGESHTATFGAAFNKQDLTDET
GNQVSDLTDISRRQWSVFSEDEWRIVDNFALTLGLRLDDDENFGDHLSPRIYGVWGLTEH
TTLKGGVSTGFRAPSLRQTVPDWGQVSRGGNMYGNPDLQPETSVNYELGIYTDLTDSITT
SAGVFYNEFEDKITRVACPATQCTDGPNQFGSDPTTYVNIDEAVTQGVEFSIDYKILSNL
ALTGNYTYTDSEQKTGAYKGSPLNQLPKHLVQLSVNYEPIDKLSTWLRVNYRGEESQPTT
GPSSSSLIAPSYTLLDLGANYRVNDSIKFSAGIYNAFDKDITEEEYGYIEDGRRYWLGMT
YSF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttgttacgtcgtaaaaagatcctcgcacagctagtttctgccgcattattgctaccc
gccactcaggttttggcggatgccgcacccgatcaagacaagatgatggaaagaatcgtt
gttaccgcatcgggtttcgagcagcaagtgcgtgacgcgcccgcttctatcagcgtgatc
acccgggaggatctcgatacacgtttttaccgtgacttaaccgacgccatgttagaagtg
cccggcgtggtggtgactggcggtgctgaccgtcgggacattagtttgcggggcatgggc
agccaatacacgctgatcctcgtcgatggtaaacgtcagtcttcccgcgagacccgcacc
aacagcgacggtcctggtgttgaaggcgcttggacgccgccgctcgccgcaatcgatagg
attgaaattgtccgcggccccatgtcatccctttatggctccgatgctatcggtggggtg
atcaacattatcacccgtaaagtgcccaatgagtggcagggggaactgcgcctcgacacc
acgctgcaggaaaagtcgtcctcgggcaatgtgtatcagggcaacttttttgtgaacggt
ggcttgattaaagatctgctcggcgtgcagttatacggccaatatacccagcgtgaagaa
gatagtatctacggcggttatcgaggtcgcgatgcggataatctcaccgccagatttgcc
ctcacgcctaaccaagaccatgacattatgttagaagtcggtatcgccaaccaagagttg
gatagcaccttagggaaaaccgttgcgccattggcgccgggcgccagttgtggccgcagt
ggttgcccagcttcgtcgacaaccgaatatgaaaacagcaccatttcgctatcgcatact
gggcgttgggactttggtacctcggacacttatatcaagcacgaagtatttgataacaag
tcccgcaagatgaagatcaagaataccgatgctcaaactagcctgatcgccaccttaggg
gaaagccataccgccaccttcggcgcggccttcaataagcaagatcttaccgatgaaacc
ggcaatcaggtcagcgacttaaccgatattagtcgccgccaatggtcggtgttctcagag
gatgaatggcgtatcgtcgataattttgccttaaccttaggcctgcgtttagacgatgat
gaaaactttggcgaccacctcagcccgcggatttacggtgtctgggggctgaccgaacat
actaccttaaaaggcggtgtgtcgaccggctttagggcgccgagcctgaggcaaaccgtg
cccgattgggggcaggtaagccgaggcggcaatatgtacggtaacccggatttacaaccc
gaaacctctgtaaactatgagctaggcatttacaccgatctcaccgattccattaccacc
agtgctggcgtgttctataacgagtttgaggacaagatcacccgtgtcgcttgtcctgcg
actcaatgtaccgatgggccgaatcagtttggctccgacccgactacctatgtgaatatc
gatgaggcagtcacccaaggggttgagtttagtatcgactataaaatcttgagcaacttg
gcattgacgggtaactacacttataccgactcggagcaaaagacgggtgcctataaaggt
agtccattgaatcaattgcctaaacatctggtgcaattgtcggttaactatgagccgatc
gataagttaagcacttggctgcgggtcaactaccgtggcgaagagagtcaaccaaccact
gggccttcctccagcagcttgattgcaccttcctatacgctgttagatttaggggccaac
tatcgcgttaatgacagcattaaattcagcgcgggtatttataacgctttcgataaggac
atcacggaagaagagtacggttatatcgaagacggccgtcgttactggttaggtatgacc
tatagcttttaa
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