Shewanella mangrovisoli: K0H60_19825
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Entry
K0H60_19825 CDS
T09316
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smay03021
]
K0H60_19825 (rpoH)
Transcription machinery [BR:
smay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K0H60_19825 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Fe_dep_repress
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QYK09015
LinkDB
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Position
complement(4557737..4558594)
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AA seq
285 aa
AA seq
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MTFQTQSMALTVPQGSSSLEAYIHSVTSMTMLDAETEYELAKRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNIRKAKTRLGWFSDDEVAMVAENLGVSKADVTEMESRMAA
QDPAFDLSSDNDDEQDFAPVHYLEDHSSDLAENIENDNWESNAQGRLLSAIKTLDERSQH
ILRARWLDDDKTTLQELAETYQVSAERIRQLEKNAMNKLKACMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcaaacgcaatcaatggcactaacagtccctcagggcagcagtagtttagaa
gcttatatccattcagtgactagcatgacaatgttagacgctgagactgagtatgagtta
gccaagcgtttgcaggaaacgggtgatctgcaagcggcgaagcaactgattatgtcgcac
ttacgttttgtggtgcacgttgctaagggctactcaggttacggtctgccacaggcggat
ttgatccaagaaggcaacatcggtctgatgaaagcggttaagcgcttcgatcccgatgtg
ggtgtccgtctagtgtcttttgctgtgcactggattaaagccgaaattcatgaatatgtg
ctgaaaaactggcgcattgtaaaagtcgcaaccactaaagcacaacgtaagttgttcttt
aatatccgtaaagcgaaaactcgcctcggttggtttagcgatgatgaggtcgcaatggtg
gcagaaaacttaggtgtatctaaggccgatgtgactgagatggaatcacgtatggcggcg
caggatcctgcgtttgacctcagcagtgataacgatgatgagcaggattttgctcctgta
cattatcttgaagatcattcatcggatttagccgaaaacatcgaaaacgataactgggaa
tccaatgcccaaggtcgtttattatcggccatcaaaaccttagacgagcgtagtcagcac
attctgcgtgcccgttggttagatgatgataaaaccacactgcaggaattagcagaaacc
tatcaagtctcggctgagcgcattcgccagttagagaaaaacgccatgaacaagcttaag
gcttgtatggaagcctaa
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