Sphingopyxis macrogoltabida 203: LH19_01180
Help
Entry
LH19_01180 CDS
T04627
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaz03032
]
LH19_01180
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_01180
Enzymes [BR:
smaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LH19_01180
DNA replication proteins [BR:
smaz03032
]
Prokaryotic type
DNA Topoisomerases
LH19_01180
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LH19_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALJ11464
LinkDB
All DBs
Position
complement(229676..230710)
Genome browser
AA seq
344 aa
AA seq
DB search
MRPGRYSAMSAVRLIHVDDSLPGIGRERAGDGWRYRDAKGKLIRDRHEIARLNAIALPPA
YEDAWFCPAPNGHILATGYDARGRKQYRYHPEFRLAREADKYDRCAAFGHALPLLRARLA
DDLARRTLCQERVVGAVVRLLDLAALRVGNEEYVTANKSFGATTLRQRHASLTGRTLRLN
YRAKGGAERVVTISDRSLTTLVRRLQDLPGQKLFQYDDDGELCAVASEDVNAYIRDAMGE
EFSAKHFRTWSASVAAFAFLYDADEPPTLKMLLAHVSDWLGNTPAIARKAYIHPAMIAAA
QERGDFASAAGPLPRATKYLSRYERGFLTYLERAPDAAALLRSA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgcggccggggcgctatagcgccatgtccgcggtccgcctgatccatgtcgacgacagc
ctgcccggcatcggccgcgaacgtgccggcgatggctggcgctatcgcgacgcgaagggc
aagctcatccgcgaccggcacgagatcgcacggctgaacgcgatcgccctgccccccgcc
tatgaggatgcatggttctgccccgccccgaacggccatatcctcgcgaccggttacgac
gcgcgcgggcgcaagcaatatcgctatcatcccgaattccggctggcgcgcgaagccgac
aaatatgaccgctgcgccgccttcggccacgcgctgccgctgctgcgtgcgcgtctcgcc
gacgacctcgcgcggcgcaccctgtgccaggaacgcgtcgtcggcgccgtcgtgcggctg
ctcgacctcgccgcgctgcgcgtcggcaacgaggagtatgttaccgcgaacaagagcttc
ggcgcgacgacattgcgccagcgccacgccagcctgaccggccgcacgctccgcctcaat
taccgcgccaagggcggcgccgagcgggtggtgacgatcagcgaccgcagcctgaccacg
ctcgtccgccgccttcaggacctccccggtcagaagctgttccaatatgacgatgacggc
gaactctgcgcggtcgcctccgaagacgtcaacgcatacattcgcgacgcgatgggcgag
gagttcagcgccaagcatttccgtacctggtctgccagcgtcgcagcctttgccttcctt
tacgacgccgacgaaccgccaacactcaagatgctgctcgcgcacgtctcggactggctc
ggcaatacgcccgcgatcgcgcgcaaggcctatatccacccggcgatgatcgccgcggcg
caggaacgcggcgacttcgcatccgctgccggaccgctgccgcgcgcgaccaaatatctt
tcgcgttacgagcgcggatttttgacctatctcgaacgcgcgcccgatgccgcggcgtta
ctgcgttccgcctga
DBGET
integrated database retrieval system
