Sphingopyxis macrogoltabida 203: LH19_02800
Help
Entry
LH19_02800 CDS
T04627
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03030
DNA replication
smaz03410
Base excision repair
smaz03420
Nucleotide excision repair
smaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH19_02800
03410 Base excision repair
LH19_02800
03420 Nucleotide excision repair
LH19_02800
03440 Homologous recombination
LH19_02800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaz03032
]
LH19_02800
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_02800
Enzymes [BR:
smaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH19_02800
DNA replication proteins [BR:
smaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LH19_02800
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LH19_02800
NER (nucleotide excision repair)
GGR (global genome repair) factors
LH19_02800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
DprA_N
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ALJ11787
UniProt:
A0AAC8YXB2
LinkDB
All DBs
Position
complement(541657..544467)
Genome browser
AA seq
936 aa
AA seq
DB search
MSEKNHLYLVDGSSYIFRAYHRLPPLTNPMGVPVGAVYGYTTMLWKLAKDLHDADGPTHL
AVILDHSSQSFRNEIYDQYKANRPEPPEDLRPQFPLIRDATRAFSLPCIEMEGFEADDLI
ASYAEAAVREGWDVTIVSSDKDLMQLIREPAEGPHVDMLDTMKNVRLGLEAVNEKFGVTP
DLVGDVLALMGDSVDNVPGVRGVGPKTATKLIQEYGNLTAALDGAATMKASKLRDNLIEH
RAMAELSRILVDLKRDCDLPDALDDLKLGAIPPLPLKTFLDEHGFRSLSAKLDLGATPGG
PPTLPRAASTPAAAPDAPSTPTLPPMPPIDRSLYETVTTIEALDRWIEAARAAHVVAVDT
ETATLDSVTGTLVGVSLSTGPGKACYIPLGHGGTDMFAEKPEQVPMADALGRLHALFADE
AVLKVGHNLKYDIGVLAQHGIAIAPYDDTLVMSFALDAGKHQHGLDELSKLHLDHVCLSF
KDVCGTGKSQISFAEVQLDRATEYAAEDAEVAWRLWKLLKLRLPLEGGTRVYEMVDRPLA
AVVETMERAGIMVNRDYLARLSGEFANDMLRMEGEIHELAGQPFAIGSPKQLGEILFDKL
GLKGGRKGKSGDWSTDQNELERLERDGVPIARRILEWRQLAKLKSTYTDALQQQINAKTG
RVHTSYSLVGAQTGRLSSTDPNLQNIPIRTETGRQIRDAFIAAPGHVLIAADYSQIELRL
AAHMADVPELKEAFAQGQDIHAATAIELFGEVNRDTRGKAKTVNFSILYGISRWGLAGRL
EVTPDEAQALIARYFERFPGISDYITDTLDSARAKGYTETLFGRKTWFPRLKAASQNERA
GSERAAINAPIQGTSADLIKRAMARMPKALEAAGLDDVKMLLQVHDELVFEAPEDKAAAA
GDVIRTVMMAAAEPALTLSVPLEVEIGIGKSWGDAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaagaatcatctctatctggtcgatggctccagctacatcttccgcgcctat
caccgcttgccgccgctgacgaacccgatgggtgtgccggtcggcgcggtttacggctat
acgaccatgctgtggaagctcgcgaaagacctgcatgacgccgacgggccgacgcacctc
gcggtcatcctcgaccacagcagccagtcgttccgcaacgaaatctacgaccaatataag
gcgaaccggcccgagccgcccgaggatctccgcccccaattcccgctgatccgcgatgcg
acgcgcgccttttcgctgccgtgcatcgagatggagggtttcgaggcggacgatctgatc
gcctcttatgccgaagccgcggtgcgcgaaggctgggacgtcacgatcgtctcgtcggac
aaggatctgatgcagctcatccgcgagcccgccgagggaccgcacgtcgacatgctcgac
acgatgaagaatgtccgcctcgggctcgaagcggtgaacgagaagttcggcgtcaccccc
gatctcgtcggcgacgtcctcgcgctgatgggcgacagtgtcgacaatgtccccggcgtg
cgcggggtcgggccgaagacggcgaccaagctgatccaggaatatggcaatctgaccgcc
gcgctcgacggtgccgcgacgatgaaagccagcaagctgcgcgacaatctgatcgagcat
cgcgccatggccgaactgtcgcgtatcctcgtcgacctgaagcgcgactgcgacctgccc
gacgcgctcgacgacctgaaactcggcgcgatcccgccgctgccgctcaagaccttcctc
gacgagcatggttttcgttcgctttcggcgaagctcgacctcggcgcgacgccgggcggg
ccgccgacgctgccgcgagcggccagcacccccgctgccgcgccggacgcgccctcgaca
ccgacgctgccgccgatgccgccgatcgaccgttcgctgtacgagacggtgacgacgatc
gaagcgctcgaccgctggattgaagcggcccgcgccgcgcatgtcgtcgcggtcgacacc
gagaccgcgacgctcgacagcgttaccggcaccctcgtcggggtcagcctgtccaccggc
cccggcaaggcctgctatatcccgcttggccatggcggcaccgacatgttcgccgaaaaa
cccgaacaggtaccgatggcggacgccctcggccgtctccacgcgctgtttgccgacgaa
gcggtgctcaaggtcgggcacaacctcaaatatgacatcggcgtgctcgcccagcacggc
atcgccatcgcaccctatgacgatacgctggtgatgagcttcgcgctcgacgcgggcaag
catcagcacgggctcgatgaattgtcgaaactccacctcgaccatgtctgcctgtcgttc
aaggacgtctgcggcaccggcaagtcgcagatcagtttcgccgaagtgcaactcgaccgc
gcgaccgaatatgcggcggaagacgctgaggtcgcctggcgcctgtggaagctgctcaaa
ctccgcttgccgctcgaaggcggcacgcgcgtctacgagatggtcgatcgcccgctcgcc
gccgtcgtcgagacgatggagcgcgccggcatcatggtgaaccgcgactatctggcgcgg
ctgtcgggcgagttcgcgaacgacatgctgcgcatggaaggcgaaatccacgaactcgcc
ggccagcctttcgcgatcggcagccccaagcagctcggcgaaatccttttcgacaagctt
ggcctgaagggcggccgcaagggcaagtcgggcgactggtcgaccgaccagaacgagctc
gaacgcctcgaacgcgacggcgtgccgatcgcgaggcggatcctcgaatggcgccagctc
gccaagctcaaatcgacctacaccgacgccttgcaacaacagatcaacgcgaaaaccggt
cgcgtccacaccagctacagcctcgtcggcgcccagaccggacgcctatcgtcgaccgat
ccgaacctgcagaatatcccgatccgcaccgagaccggacgccagatccgcgacgccttt
atcgcggcacccgggcatgtgctgatcgccgccgactatagccagatcgagctgcgcctc
gccgcgcatatggccgacgtccctgagctcaaagaggcctttgcgcaggggcaggacatc
catgccgcgaccgcaatcgaactgttcggcgaggtcaaccgcgatacgcgcggcaaggca
aagacggtcaatttctcgatcctctacggcatctcgcgctggggcctcgcaggccggctc
gaagtcacgcccgacgaggcgcaggcgctgatcgcccgctatttcgagcgcttccccggc
atcagcgactatatcaccgacacgctcgatagcgcgcgcgccaaaggctataccgagacc
ttgttcgggcggaaaacctggttcccgcgcctcaaggcggcgagccagaacgaacgcgcg
ggcagcgaacgtgccgcgatcaacgcgccgatccagggcaccagcgccgacctgatcaag
cgcgcgatggcgcggatgccgaaggcgctcgaagccgccgggctggacgatgtcaaaatg
cttctgcaagtccacgacgaactcgtcttcgaggcgcccgaggacaaggccgcggcggcg
ggcgacgtcattcgcaccgtcatgatggccgccgccgaaccggcgctcaccctctcggtg
ccgctcgaggtcgaaatcggcatcggcaagagctggggcgacgcgcattga
DBGET
integrated database retrieval system
