Sphingopyxis macrogoltabida 203: LH19_04945
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Entry
LH19_04945 CDS
T04627
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smaz03016
]
LH19_04945
Enzymes [BR:
smaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LH19_04945
Transfer RNA biogenesis [BR:
smaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LH19_04945
Prokaryotic type
LH19_04945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALJ12208
UniProt:
A0AAC9AUB0
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All DBs
Position
complement(1000516..1001259)
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AA seq
247 aa
AA seq
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MTRFALTIEFDGRPFMGWQRQSHGPSVQQALEEAVTRITGEAAAVHGAGRTDAGVHAIAM
RAHVDIEKPIQPFRLMEALNAQLRPAPVAVLACAEVAGDWHARFSCIGRAYEYRIVNRRA
PLTWDKGLSWQFAKPLDAEAMHGAAQALVGRHDFTTFRSVHCQADSPVKTLDRISVSRHG
DEIIIETAARSFLHHQVRSMVGCLSMVGEGKWSARDLKAALDAADRSALGLNAPPDGLYF
VEAKYPE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtttcgccctcaccatcgaattcgacggccgccccttcatgggctggcagcgg
cagagccacgggccgagcgtccagcaggcgctggaagaggcggtcacgcgcatcaccggc
gaagcggccgcggtgcacggcgcgggccgcaccgacgccggggtccacgcgatcgcgatg
cgcgcgcatgtcgatatcgaaaagccgatccagccgttccggctgatggaggcgctcaac
gcgcagcttcgcccggcgcccgtcgcggtgctcgcctgcgccgaggtggcgggcgactgg
cacgcgcgcttttcgtgcatcgggcgcgcctatgaatatcgcatcgtcaaccgccgcgcc
ccgctgacctgggacaaggggctgtcgtggcagttcgccaagccgctcgacgccgaggcc
atgcacggcgccgcgcaggcgctggtcggacgccatgacttcacgacctttcgctcggta
cattgccaggccgacagcccggtcaagacgctcgaccggatcagcgtcagccgccacggc
gacgagatcatcatcgaaaccgcggcgcgcagcttcctccaccatcaggtgcgctcgatg
gtcggctgcctcagcatggtcggcgaaggcaaatggtcggcccgcgatctcaaagccgcg
ctcgacgccgccgatcgcagcgcgctggggctgaacgcgccgcccgacgggctgtatttc
gtcgaggcgaaatatccagaatga
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