Sphingopyxis macrogoltabida 203: LH19_06445
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Entry
LH19_06445 CDS
T04627
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaz03032
]
LH19_06445
03036 Chromosome and associated proteins [BR:
smaz03036
]
LH19_06445
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_06445
DNA replication proteins [BR:
smaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LH19_06445
Chromosome and associated proteins [BR:
smaz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LH19_06445
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LH19_06445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ALJ12502
UniProt:
A0A0N9UWV9
LinkDB
All DBs
Position
complement(1296180..1296458)
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AA seq
92 aa
AA seq
DB search
MIRSELVQKIASENSDLRLEEVERIVDAFFDSIVDQLASGGRVELRGFGAFSTRSRESRT
GRNPRTGAPVAVKAKAVPYFKPGKEMRERLND
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcggaactggttcaaaagatcgcaagcgaaaacagcgacctgcgccttgag
gaggtcgagcgcatcgtcgatgcctttttcgactcgatcgtcgatcaactcgcctctggc
ggtcgcgtcgaactgcgcggattcggggcgttttcgacccgcagccgcgaatcgcgcacc
ggccgcaacccgcgcacgggcgcacccgtcgcggtgaaggccaaggcggtgccctatttc
aagcccggcaaggaaatgcgcgagcggctgaacgactga
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