Sphingopyxis macrogoltabida 203: LH19_07715
Help
Entry
LH19_07715 CDS
T04627
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03030
DNA replication
smaz03430
Mismatch repair
smaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH19_07715
03430 Mismatch repair
LH19_07715
03440 Homologous recombination
LH19_07715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaz03032
]
LH19_07715
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_07715
Enzymes [BR:
smaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH19_07715
DNA replication proteins [BR:
smaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH19_07715
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH19_07715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
tRNA_anti-codon
COE1_HLH
Motif
Other DBs
NCBI-ProteinID:
ALJ12753
UniProt:
A0AAC9FFL6
LinkDB
All DBs
Position
1497562..1501050
Genome browser
AA seq
1162 aa
AA seq
DB search
MAYSPFVPLRVFSSFTMLEGAIDPKAIAKAARDRGFPAIAICDRNGLYGSMAFGEACKAA
GVQPIVGAMLSVARPGQRLANGAPLIDWLALYAQDETGYGNLCALVSSAHLDRPIEQDPH
VTLPALAGKTDGLICLTGGGEGALARLLAGEQATAADDYVEQLEALFGGRLYIELSRRGD
ATEKAAEQALVDMAYARALPIVATNPASFVEPQFHPAHDAMLCIAQSAYVESEDRRTSSP
EAWLKPAEAMEDAFSDLPEAMHNTLVVAQRCAYMAPKRAPILPSLAGDREGEAAQLAADA
RAGLDARLALIPELTEEERNAYIARLDFEVGVIVQMGFPGYFLIVADFIKWAKAHDIPVG
PGRGSGAGSVVAWALTITDLDPLKLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQ
EKYGRDTVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLVPNHPTDPWTLDRALNG
VAELMTEYKQDDGVRRLFDMAKQLEGLPRHSSTHAAGVVIGDRPLDQLVPLYRDPRSDMP
VTQFDMKYVESAGLVKFDFLGLKTLSVLKEARRLLALRGIDVDLDALAWDDTAVYELLQR
GETVGVFQLESEGMRRTLSAVKPTNFGDIIALVALYRPGPMDNIPLFGARKNGREAIAYP
HPLLEGILAETYGIFVYQEQVMQAAQILAGYSLGGADLLRRAMGKKVQAEMDAQRETFVT
GCGEHNQIAPKAANELFDLIDKFAGYGFNKSHAAAYALLSYQTAWLKAHYPHEFFAASMS
FDSHQTDKLSIFIDDMRRLGVEVAPPSINDSEADFSVGRSEEGLAVRYALGALKGVGEKA
METLVAERHAKGDFASLDDFAARIDPKQLNRRQIEALAGGGAFDPVEPDRPRAYAGAEAL
LACANSSAHERSTGQGGLFGGDVAIMPVLQLPAAEPWTLAERMTREKEAFGFYFSAHPVE
QYEAIIAARGARSYGDICENVEMTPGTRIPMVMAAMVESARPRVSQRGNRFLNLTLSDRS
GQFQSSCFDEGAGKILEALAADGGCAMLSVELDLLEGEETPRVTVRGAQSLVDIAATAAL
QLTCRVELAEAVAEIAKLLECRDDARGRVILSTRDPLTDEDVRIELGRRFALGPDVVARL
DMIGGVTEAALSLVAPREFRVR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggcctatagcccctttgttccgctccgcgtcttttccagtttcaccatgctggagggg
gcgatcgaccccaaggcgatcgccaaggcggcgcgcgaccgtggctttccggcgatcgcc
atctgtgaccgcaacgggctctatggctcgatggcgttcggcgaggcgtgcaaggcggca
ggggtgcagccgatcgtcggtgcgatgctgagcgtcgcgcggccgggacagcggctggcg
aacggcgcgccgctgatcgactggctcgcgctctatgcgcaggacgagacggggtatggc
aatctctgcgcgctcgtctcctcggcgcatctcgatcggccgatcgaacaggacccccac
gtcacgctgccggcgctggcgggcaagaccgacgggctcatctgcctcaccggcggcggc
gagggagcactggcgcgcctgctcgcgggcgagcaggcgaccgcggcggacgattatgtc
gaacaactcgaggcgctgttcggcggacggctctatatcgaattgtcgcggcgcggcgac
gccaccgaaaaggcggcggagcaggcgctggtcgacatggcctatgcgcgcgcgctgccg
atcgtcgcgaccaatcccgccagcttcgtcgaaccgcaattccaccccgcgcacgatgcg
atgctgtgcatcgcgcagtcggcctatgtcgagagcgaggaccggcgaacgagcagtccc
gaggcctggctgaagcccgccgaggcgatggaggatgcgttttcggacctgcccgaggcg
atgcacaatacgctggtggtcgcgcagcgctgcgcctatatggcgcccaagcgcgcgccc
atcctgccgagcctggccggcgaccgcgagggcgaagcggcgcagctcgccgccgacgcg
cgcgccggactggacgcgcggctcgctctgatacccgaactgaccgaagaggagcgtaac
gcctatattgcgcggctcgatttcgaggtcggggtcatcgtccagatggggttcccgggt
tacttcctgatcgtcgccgacttcatcaaatgggcgaaggcgcacgatattccggtgggg
ccgggccgcggctcgggggcgggcagcgtcgttgcctgggcgctgacgatcactgacctc
gatcctttgaagctgggcctgctgttcgagcgcttcctcaaccccgagcgcgtgtcgatg
cccgatttcgacatcgacttctgcgaaacgcggcgcggcgaggtgatccgctatgtgcag
gagaaatacggccgtgataccgtcgcgcagatcatcaccttcggtaagctgaaggcgcgc
gcggtgctcaaggacaccggccgcgtgctgcagatgagctatgggcaggtcgaccggctt
gccaagctggtgcccaaccatccgaccgacccgtggacgctggaccgcgcgctcaacggc
gttgccgagctgatgaccgaatataagcaggacgacggggtgcggcggctgttcgacatg
gccaagcagctcgaaggcctgccgcggcacagctcgacccacgccgcgggggtggtgatc
ggcgaccggccgctcgaccagctcgtgccgctgtatcgcgatccgcgatcggacatgccg
gtgacgcagttcgacatgaaatatgtcgagagcgcggggctggtgaaattcgactttctc
ggcctcaagacgctgtcggtgctgaaggaggcgcggcggctgctcgcgctgcgcggcatc
gacgtcgacttggatgcactcgcgtgggacgacacggcggtctacgaactgctccagcgc
ggcgagacggtcggcgtgttccagctcgaatccgaaggcatgcggcgcacgctgtcggcg
gtgaagccgaccaatttcggcgacatcatcgcgctcgtcgcgctctatcgtcccggtccg
atggacaatatcccgctgttcggcgcgcgcaagaacggccgcgaggcgatcgcctatccg
cacccgctgctcgaaggcatccttgccgagacctatggcatcttcgtctatcaggaacag
gtgatgcaggcggcgcagatcctcgcgggctacagcctcggcggcgccgacctgctgcgc
cgcgcgatgggcaagaaggtccaggccgaaatggacgcgcagcgtgagacctttgtcact
ggctgcggcgagcataaccagatcgcccccaaggcggcgaacgagctgttcgacttgatc
gacaagttcgcgggctatggcttcaacaagagccatgccgccgcctatgcgcttctgtcg
taccagaccgcctggctgaaggcgcattatccgcacgaattcttcgccgcgtcgatgtcg
ttcgacagccatcagaccgacaagctgtcgatcttcatcgacgatatgcgtcggctgggg
gtcgaggtggcgccgccgtcgatcaacgacagcgaggccgatttctcggtcgggcgcagc
gaagaggggctggcagtgcgttatgcgctcggcgcgctcaagggagtcggcgaaaaggcg
atggaaacgctcgtcgccgaacgccatgcgaaaggcgatttcgcgagcctcgacgatttc
gcggcgcgcatcgaccccaaacagctcaaccggcgccagatcgaagcgctcgccggtggc
ggcgcgttcgacccggtcgaacccgaccggccgcgggcctatgccggcgcagaagcgttg
ctcgcctgcgcgaacagctcggcgcacgaacggtcgaccgggcagggcgggctgttcggc
ggcgatgtcgcgatcatgccggtcctccagcttccggcggccgagccatggacgctggcc
gagcggatgacgcgcgaaaaggaagcgttcggtttctatttttcggcgcatccggtcgag
caatatgaggcgatcatcgcggcgcgcggcgcgcggagttatggcgacatttgcgagaat
gtcgaaatgacgccgggaacgcgcatcccgatggtgatggcggcgatggtcgaaagcgcg
cgcccgcgcgtgtcgcagcgcggcaaccgtttcctcaatctgaccttgtccgaccgcagc
ggccagttccagtcgagctgtttcgacgagggtgcgggcaagatactcgaagcgctcgca
gccgatggcggctgtgccatgctgtcggtcgaactcgatctgctcgaaggcgaggaaacg
ccgcgcgtaacggtgcggggggcgcagtcgctcgtggacatcgccgcgacggcggcgctg
caactgacgtgccgggtcgagctggccgaggcggtggcggagatcgcgaaactgctcgaa
tgccgcgacgatgcgcggggccgtgtgatcctgtcgacccgcgatccgctgaccgacgag
gatgtccgcatcgaactggggcggcgtttcgcgctgggtcccgatgtcgtcgcgcggctc
gatatgatcggcggcgtcaccgaagccgcgctgtcgctggtcgcgccgcgcgagttccgg
gtgcgttag
DBGET
integrated database retrieval system
