Sphingopyxis macrogoltabida 203: LH19_07740
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Entry
LH19_07740 CDS
T04627
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH19_07740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_07740
Enzymes [BR:
smaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LH19_07740
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH19_07740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4880
Motif
Other DBs
NCBI-ProteinID:
ALJ12758
UniProt:
A0AAC8Z0L7
LinkDB
All DBs
Position
complement(1506187..1506972)
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AA seq
261 aa
AA seq
DB search
MGGQKSALLAESICDWWSLAGVDGLVGEEPAGWLVLPPANDAAPPKLKAPAAEPEAMPLP
AALQRQEAPVAPAAKGPVVFPEDWAAFQNWLAEDPDVPGSQWDARRVLPTGNPGAPLMLF
TAWPEVDDQRDGALFAGPAGTLLDAMLRAIGASRADCYVASLAITRPPGGRCDERDTAEL
DRLLWHHLRLAGPERLLLIGSDIVRMAANIALADARGRLLDVNQDGRKMETVAVAHPAML
LARPAHKAAAWDSLKLFNRGR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggcaaaaatcggccttgttggcggaaagcatttgcgactggtggtcgctggct
ggcgtcgatggacttgtcggcgaggagccggcaggctggctggtcctgccgccggcgaat
gatgccgctcctccgaaactcaaggcgcccgccgccgagcccgaagcgatgcccctcccg
gccgcgctccagcggcaggaagcgccggtagcgcccgccgccaagggccccgtcgtcttt
ccggaagactgggccgcgttccagaactggctggccgaagatcccgacgttccgggcagc
cagtgggatgcccgccgcgtcctgcccaccggaaatcccggcgcgccgctgatgctgttc
accgcctggcccgaggtcgacgaccagcgcgacggcgccttgtttgcgggtcccgcggga
accttactcgatgcgatgctccgcgcgatcggcgccagccgcgccgactgttatgtcgcg
agcctcgccatcacccggccgccgggcggccgctgcgacgagcgggacacggccgaactc
gaccggctgctctggcatcatctgcggcttgcggggcccgaacggctcctgctgatcggc
agcgacatcgtgcgcatggccgcgaacatcgcgcttgccgatgcgcgcggaaggttactc
gatgttaaccaagatggccgcaagatggagacagtggccgtcgcgcaccccgcgatgctg
ctggcccggcccgcccacaaggcagcggcctgggatagcctcaaactgttcaaccgggga
cgttga
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