Sphingopyxis macrogoltabida 203: LH19_07925
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Entry
LH19_07925 CDS
T04627
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smaz03019
]
LH19_07925
03009 Ribosome biogenesis [BR:
smaz03009
]
LH19_07925
03036 Chromosome and associated proteins [BR:
smaz03036
]
LH19_07925
Enzymes [BR:
smaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LH19_07925
Messenger RNA biogenesis [BR:
smaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LH19_07925
Ribosome biogenesis [BR:
smaz03009
]
Eukaryotic type
90S particles
RNase
LH19_07925
Prokaryotic type
rRNA processing factors
LH19_07925
Chromosome and associated proteins [BR:
smaz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LH19_07925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ALJ12795
UniProt:
A0A0P0DLU7
LinkDB
All DBs
Position
complement(1546609..1547289)
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AA seq
226 aa
AA seq
DB search
MNDTLDTGALADIIGRAPGNLALYDQALTHGSTGRADYQRLEFLGDRVLGLVIASELYTR
FPAATEGELSSRLHALASGETCAAIARRLDLTALVRFGAQARSDGGRYSDNIAADAIEAL
IGALYLDQGADAARAFILAHWGAMIEGQQAAPKHPKAALQEWALARKRRPPEYEIVAREG
PDHAPRFRVAVSVGKLARAEAEGASKQAAEKAAAAALLAELEGQEK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgacaccctcgacaccggggcgctcgccgacatcatcggccgcgccccgggcaac
ctggcactttacgatcaggccctgacccacggcagtacgggccgcgccgactatcagcgg
ctcgaatttctcggcgaccgcgtcctcgggctcgtcatcgcgtccgagctctatacgcgt
tttcccgccgcaaccgagggcgagctttcgtcgcggttgcatgcgctcgcctcgggtgaa
acctgcgccgccatcgcgcgccggctcgaccttaccgcactcgtccgcttcggggcgcag
gcacgcagcgatggtggccgatacagcgacaatatcgctgccgacgcgatcgaggcgctg
atcggcgcgctctatctcgaccagggagccgatgcggcgcgcgctttcattctcgcccac
tggggcgcgatgatcgagggccagcaggccgcacccaaacacccgaaggcggcgcttcag
gaatgggcgctggcgcgcaagcggcgcccgcccgaatatgagatcgtcgcgcgcgaaggc
cccgaccatgccccgcgctttcgcgtcgcggtgagcgtcggcaagctcgcgcgcgccgaa
gccgaaggcgcgagcaaacaggcggccgaaaaagcggcagcggcggcgctgctcgccgaa
ctcgaaggacaggaaaaatga
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