Sphingopyxis macrogoltabida 203: LH19_08545
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Entry
LH19_08545 CDS
T04627
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH19_08545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smaz03019
]
LH19_08545
Messenger RNA biogenesis [BR:
smaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LH19_08545
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ALJ12918
UniProt:
A0AAC9FFJ5
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All DBs
Position
complement(1678942..1679418)
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AA seq
158 aa
AA seq
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MIDHSALPYRPCAGVMLANRDGRIFVGQRLDTTSEAWQMPQGGIDDGESPEDAAIRELSE
ETGVHGGLVEIIARSREEYFYDLPDHLIGKMWGGKYRGQRQHWFLMRFMGADGDVNIHTK
HQEFRAWKWAELNEIEKLIVPFKRVLYRGLVEEFGPLV
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccatagtgccctgccctaccgtccctgcgccggagtcatgctcgcgaaccgc
gacgggcgtatcttcgtcgggcaacgcctcgatacgaccagcgaggcctggcagatgccg
caaggcgggatcgacgacggcgagagtcccgaagatgcggcgatccgcgaactcagcgag
gaaaccggcgtgcacggcgggctggtcgagatcatcgcgcgcagccgcgaggaatatttt
tacgacctgcccgaccatctgatcgggaaaatgtggggcgggaaatatcgcggccagcgc
cagcactggttcctgatgcgcttcatgggcgcggacggcgacgtcaatatccacacgaaa
catcaggaattccgtgcctggaaatgggccgaactgaacgagatcgagaaactgatcgtg
ccgttcaagcgcgtcctctatcgcgggctggtcgaggagttcggcccgctcgtctga
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