Sphingopyxis macrogoltabida 203: LH19_10520
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Entry
LH19_10520 CDS
T04627
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaz03032
]
LH19_10520
03036 Chromosome and associated proteins [BR:
smaz03036
]
LH19_10520
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_10520
DNA replication proteins [BR:
smaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LH19_10520
Chromosome and associated proteins [BR:
smaz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LH19_10520
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LH19_10520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
CcFV1_CP
Peptidase_M35
KORA
Motif
Other DBs
NCBI-ProteinID:
ALJ13301
UniProt:
A0A0P0DQ23
LinkDB
All DBs
Position
complement(2063298..2063570)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQDLIATVADSSGLTKGDASKAVEAVFDAVTAALKKGGEVRLVGFGTFSVSKRKASTG
RNPRTGETMTIAASNQPKFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaagacctgatcgccaccgtcgctgactcgagcggccttaccaagggcgat
gcgagcaaggcggttgaagccgttttcgacgcggtcaccgcggcactgaagaagggcggc
gaagtccgtctggtcggtttcgggacgttctcggtcagcaagcgcaaggcgtcgaccggc
cgcaacccgcgcaccggcgaaacgatgaccatcgcggcgtcgaaccagccgaagttcaag
gccggcaaggccctcaaggacgcctgcaactga
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