Sphingopyxis macrogoltabida 203: LH19_11185
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Entry
LH19_11185 CDS
T04627
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaz03032
]
LH19_11185
03036 Chromosome and associated proteins [BR:
smaz03036
]
LH19_11185
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_11185
DNA replication proteins [BR:
smaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LH19_11185
Chromosome and associated proteins [BR:
smaz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LH19_11185
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LH19_11185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ALJ13432
UniProt:
A0AAC9FFE1
LinkDB
All DBs
Position
2202456..2202731
Genome browser
AA seq
91 aa
AA seq
DB search
MNHADLSDAVATMLGTSKADGKKAVDAVFAAIADAAAKGEEVSVNGFGKFKVKESAAREG
RNPSTGETIQIAASKKLGFGAAKAVKDRLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgccgacctttcggacgcggttgcgacgatgctcggaaccagcaaggccgac
gggaagaaggctgtcgacgccgtgttcgccgcgatcgccgacgccgccgcaaagggcgaa
gaagtttcggtgaacggctttggcaagttcaaggtcaaggaaagcgcagcccgcgagggc
cgcaacccttcaaccggtgagactatccagatcgcagcctcgaaaaagctcggcttcgga
gcggccaaggcggtcaaggatcgcctcaacggctaa
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integrated database retrieval system
