Sphingopyxis macrogoltabida 203: LH19_11430
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Entry
LH19_11430 CDS
T04627
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LH19_11430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_11430
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LH19_11430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ustilago_mating
Motif
Other DBs
NCBI-ProteinID:
ALJ13480
UniProt:
A0AAC9AUU5
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All DBs
Position
2241980..2242864
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AA seq
294 aa
AA seq
DB search
MAARPYWKGQIRLALVSIPVEIYSATKSGATIAFNQIHEPTGKRIKYEKVVPGVGPVDVD
EIVKGFQYAKDQYVLLDDEEIEGVKLESKKTLELTQFVEAEDIDEIYFEKPYYVVPADDL
AEEAFIVLREALRRTGKVGLGQLAMRGREYVVSIKACGRGLVMETLRYADEVNKAASYFR
DIADSDPDEDLLDLATTLIDKKTGKFDASDFHDRYVEALKELIERKKKGKTLNLDDGKDE
KAPSGSNVVDLMAALKKSIGDGGGKAKAASAKKAPAKKTPTKKAPTKTAARKRA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcgcccttattggaaaggccagatccgcctggcgctcgtttcgatcccggtc
gagatctattcggcgacgaagagcggggcgacgatcgcgttcaaccagatccacgagccg
accggcaagcgcatcaaatatgaaaaggtcgtccccggcgtcggcccggtcgacgtcgac
gagatcgtcaagggattccaatatgccaaggaccaatatgtgctgctcgacgacgaggag
atcgaaggggtcaagctcgaaagcaagaagacgctcgagctcacccagttcgtcgaggcc
gaggatatcgacgagatctatttcgagaagccctattatgtcgtccccgccgacgacctt
gccgaggaagcgttcatcgtgctgcgcgaggcgctgcgccgcacgggcaaggtcggtctc
ggccagctcgcgatgcgcggccgtgaatatgtcgtcagcatcaaggcgtgcggccggggt
ctcgtcatggagacgctgcgctatgccgacgaggtcaacaaggcggcgagctatttccgc
gacattgccgacagcgatcccgacgaagacctgctcgacctcgcgacgacgctgatcgac
aagaagacgggcaagttcgacgcgagcgactttcacgatcgctatgtcgaggcgctgaag
gagcttatcgagcgcaagaagaagggcaagacgctcaatctcgacgacgggaaggacgag
aaggcgccgagcggatcgaacgtcgtcgacctgatggcggcgctcaagaaatcgatcggc
gacggcggcgggaaggccaaggccgccagcgccaagaaggcgccggccaaaaagacgccg
acgaaaaaggcgccgaccaagaccgccgcgcgcaagcgcgcatga
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