Sphingopyxis macrogoltabida 203: LH19_11895
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Entry
LH19_11895 CDS
T04627
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaz03032
]
LH19_11895
03036 Chromosome and associated proteins [BR:
smaz03036
]
LH19_11895
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_11895
DNA replication proteins [BR:
smaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LH19_11895
Chromosome and associated proteins [BR:
smaz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LH19_11895
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LH19_11895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
RuvA_C
DUF2267
Asp_DH_C
Motif
Other DBs
NCBI-ProteinID:
ALJ13573
UniProt:
A0AAC9AV03
LinkDB
All DBs
Position
complement(2320892..2321167)
Genome browser
AA seq
91 aa
AA seq
DB search
MNQAELSDRVATSLGLSKAEGKKAVDAVIAAITDAAASGEEVSISGFGKFKVSTSAAREG
RNPSTGETMQIAAKKKLGFSAAKAVKDRLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggccgaactttcggatcgcgttgcaacctcgctgggactttcgaaggccgag
ggcaagaaggccgtcgacgccgtgatcgccgcgattaccgatgccgctgccagcggcgaa
gaagtgtcgatcagcggcttcggcaagttcaaggtgtcgacctcggccgcgcgtgagggc
cgcaacccttcgaccggcgagaccatgcagatcgctgccaagaaaaagctcggcttctcg
gccgccaaggccgtcaaggatcgcctcaacggctga
DBGET
integrated database retrieval system
