Sphingopyxis macrogoltabida 203: LH19_12895
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Entry
LH19_12895 CDS
T04627
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz02010
ABC transporters
smaz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LH19_12895
03070 Bacterial secretion system
LH19_12895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smaz02000
]
LH19_12895
02044 Secretion system [BR:
smaz02044
]
LH19_12895
Transporters [BR:
smaz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LH19_12895
Secretion system [BR:
smaz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LH19_12895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
ABC_ATPase
AAA_29
AAA_22
DUF87
SbcC_Walker_B
AAA_18
RsgA_GTPase
AAA_21
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ALJ13767
LinkDB
All DBs
Position
complement(2536294..2538468)
Genome browser
AA seq
724 aa
AA seq
DB search
MEGGRDRINSTDHQKSAARGRNDLVAFATLLSLHRIAVDPDQLRHDLGHQHDVTADDLLR
LAKRQTDVRARRVVVGGGDLKMLPLPALAHGRDGWFLIGKAGQDMVLIQRPNNAPERLSY
GDMEERWSGELILITTREGVGGPVGRFDVSWFVPQIVKYRRLVGEVLLITLALNLLGLAA
PLFFQNIIDKVLVHNTMATLQVLAFGFVAVSVWEVAFGWIRTRLYSETCQKIDVELGARL
FRHMLGLPLAYFEARRVGDTAMRIRQLETIREFLTNASMSVLIDPIFVIVFLAAMWIYSP
TLFVITAITLPAYVAVAALLTKPLRARIDEKFERGAANNALLIESISGIQTVKASAVEPQ
WQDRWERQLAGYSAANQQVINLGNTGSQAIQLISKLNLAAILYFGAVAVIEGNLTVGGLV
AFNMFAQRVSGPVIRMAQLWQEFQQVRIAVERLGDVLNQPTEPGAGSRTALPTVKGHIRF
EGVKFRYGLDGPWTLEDIDIDLEAGATLGIVGSSGSGKSTLTKLLQRLYTPAAGRILIDG
VDIGQIDPAWLRRQIGVVLQENLLFNRSIRENIALSHPAMPLDHVMAAAQLAGAHEFIVR
LPQGYDTVVEERGVNLSGGQRQRLAIARALVTQPRILILDEATSALDAESEAIIQRNLKA
MAQGRTVLIIAHRLSAIRQCQRIIALEQGRIVERGTHEELLVHGGRYADLYRQQMGLADG
GVAA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggtggtcgggatcgaataaactctaccgaccatcagaaaagtgcggcgcgcggg
cgtaatgatcttgttgcattcgcaacgcttctatctctccacagaatcgccgtcgatccc
gatcaactccgccatgatctaggtcaccaacatgatgtgacggcagatgatctcttgcgg
ctggcaaagcgacaaactgatgtgcgcgctaggcgcgtcgttgtagggggcggcgatctt
aagatgcttccccttccggcattggcccatggaagggacggctggttccttattggaaag
gccgggcaggatatggtcctgatccagcgtcccaacaacgctcccgaacggttgtcatat
ggggatatggaagagcgttggtccggcgaacttattttgattacgacgcgcgaaggtgtc
ggtggcccagtaggccgtttcgatgtcagttggttcgtgccccagatcgtcaaataccgc
cgtcttgtcggcgaggttctgttgatcacgctcgcgttgaaccttcttggcctcgcggca
ccgctcttcttccagaatatcatcgataaggtgctcgtgcacaatacgatggcaactctt
caggtgctcgcatttggttttgttgcggtcagcgtgtgggaggtcgcattcggctggata
agaacgcgtctctattcggaaacctgccagaagatagatgtcgagctgggggcgcggctg
ttccgtcacatgttaggattgccgctcgcctatttcgaggcgcgtcgcgtcggcgatacg
gcgatgcgcattcgtcagctggagacgatccgggagtttttgaccaacgcgtctatgtcg
gtgctgatcgaccccatcttcgtaatcgtgttccttgcagcgatgtggatctattcgccg
acgctcttcgtgatcactgcgatcaccttaccggcctatgtcgcagtcgcggcactgctg
accaaaccgctccgcgcgcggatcgatgaaaagttcgagcgcggagcggccaacaatgcg
ctgctgatcgagagcatttcgggcattcagactgtcaaggcgtcggcggtcgaaccgcaa
tggcaggatcgttgggaacgtcagcttgcaggttacagtgccgcgaaccagcaagtcata
aatttggggaataccgggtcacaggcgatccagctgatctcgaagctcaatcttgccgca
atcctctatttcggtgcggtcgcggtgattgaaggtaatctgactgtcggcggtctcgtc
gccttcaacatgtttgcgcagcgggtgtcgggaccggtcatccgcatggcgcaactctgg
caagagtttcaacaggtgcgtatcgccgttgagcgtcttggcgatgtcctcaaccaaccg
acggagccgggggccgggagtcggacggcccttcccaccgtaaagggccatattcgtttt
gagggcgtgaagttccgctacgggctcgatgggccttggacgctcgaagacatcgatatc
gatctggaagcgggggcgacgctcggtatcgtcggctcatcgggatcgggtaaatcaacg
ctcaccaaactgctccagcgcctttacaccccggccgcaggccgcatcctcatcgatggc
gtcgatatcggtcagatcgatccggcttggctacgtcgacagatcggagtggttcttcag
gaaaatctcctgttcaaccgatcgatccgcgagaacatcgcgctgagccatccggcgatg
ccgctcgatcatgtaatggcagccgctcagcttgcaggcgcccacgagttcattgttcgc
ctaccgcagggctatgacacggtcgttgaggagcgcggcgtcaacctctctggcgggcag
cgtcagcggctcgcaatcgcccgggctctcgtcacacagccgcggattctcatcctcgac
gaagcaacttccgcgctcgacgctgaaagcgaggcgatcattcaacgcaacctcaaggcg
atggcgcaggggcgcacggtgctcatcatcgcacatcgcctgtcggcgatccgccagtgc
cagcgcatcattgctctggaacaaggacgtatcgtcgagcgcggtacgcatgaagaattg
ctggttcacggcgggcgttacgccgatttatatcgtcagcaaatgggtttggccgatggc
ggagtggctgcatga
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