Sphingopyxis macrogoltabida 203: LH19_14860
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Entry
LH19_14860 CDS
T04627
Name
(GenBank) DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH19_14860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_14860
Enzymes [BR:
smaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LH19_14860
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH19_14860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALJ14148
UniProt:
A0AAC8Z2F7
LinkDB
All DBs
Position
2927493..2928110
Genome browser
AA seq
205 aa
AA seq
DB search
MGLSQQQLNAGIDALAALDTNFARAFGHAGYPEPRIRAPGYTTLLRTIVGQQVSVAAANS
IWNKLEAGFGEGCPAEAVAAADFDALRACGLSGQKQGYAKSLAQLILDGELKFDALPADD
EEAIALLTKVKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQEAVGRILQLEARPSEKRVRE
LGEAWRPHRGAAAIFSWHCYNMDVI
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgagccagcagcagctcaacgccggaatcgacgccctcgcggcgctcgatacc
aatttcgcgcgcgcgttcggccatgcgggctatcccgaaccgcgtatccgcgccccgggt
tacaccacgcttttacgcactatcgtcggccagcaggtcagcgtcgccgccgccaattcg
atctggaacaagctggaagcgggttttggcgagggttgtccggccgaagcggtggccgcc
gccgatttcgatgcgctgcgcgcgtgcggcctgtccgggcagaaacagggctatgcgaaa
agcctcgcgcaattgatcctcgacggcgaactgaaattcgacgccctgcccgccgacgac
gaggaagcgatcgccctgctcaccaaggtcaagggcatcggccgctggtcggccgaaatc
tacctgctctttgccgagggacgccccgacatctggcccgcgggcgaccttgcggtacag
gaggcggtcggccgcattctccaactcgaagcccggccgagcgagaaacgggtacgcgag
ctcggcgaagcctggcgcccgcatcgcggcgccgccgccatcttcagttggcactgttat
aatatggatgtgatctag
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