Sphingopyxis macrogoltabida 203: LH19_15100
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Entry
LH19_15100 CDS
T04627
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LH19_15100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smaz03019
]
LH19_15100
03009 Ribosome biogenesis [BR:
smaz03009
]
LH19_15100
04131 Membrane trafficking [BR:
smaz04131
]
LH19_15100
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smaz04147
]
LH19_15100
Messenger RNA biogenesis [BR:
smaz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LH19_15100
Ribosome biogenesis [BR:
smaz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
LH19_15100
Membrane trafficking [BR:
smaz04131
]
SNARE
SNARE associated proteins
Others
LH19_15100
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LH19_15100
Exosome [BR:
smaz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LH19_15100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_33
CDC48_2
AAA_2
AAA_14
TIP49
AAA_lid_PRS2_C
IstB_IS21
AAA_18
AAA_28
nSTAND3
Mg_chelatase
NPHP3_N
RNA_helicase
Sigma54_activat
DUF815
AAA_7
Vps4_C
AAA_24
AAA_17
AAA_30
AAA_3
ABC_tran
AAA_11
AAA_19
Zeta_toxin
TsaE
AAA_25
Parvo_NS1
ATPase
NB-ARC
Viral_helicase1
Sigma54_activ_2
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
ALJ14196
UniProt:
A0AAC8Z267
LinkDB
All DBs
Position
complement(2981504..2983828)
Genome browser
AA seq
774 aa
AA seq
DB search
MADAPVKEKQVKLQVANARAEESGGGVARISRAAMAELGVTEGDIIGINGKRETASRVMA
PYAEDEGLEVVRLDGLQRANAGAGAGDMVTLSRVETRPATRVVFAPAQENLRLQGSANAL
KRSFFGRPLVAGDTVATAGQQRVSAGDMPPQLRQMLNAPAYALAEVRLLVVSASPKGVVF
IDENTEVELLPEFQEPQDSRRTDVTYDDLGGLGETIDQLREMVELPLRYPELFRRLGVDP
PRGVLLHGPPGTGKTRLARAVANESEAQFFLINGPEIMGSAYGESEKRLRDIFEQAAKSA
PSILFIDEIDSIAPKRGQVQGEAEKRLVAQLLTLMDGLEPRTNLVVIAATNRPDAIDEAL
RRPGRFDREIVIGVPDEKGRREILGIHTRGMPLGENVDLDELARTTFGFVGADMAALTRE
AAIEAVRRIMPKLNLEEGTIPPEVLDELRVTREDFNNALKRVQPSAMREVMVQAPKTRWS
DIGGLDAARDKLIEGIELPLKNPEAFRRLGIRPAKGFLLYGPPGTGKTLLAKAAARESDA
NFISIKSSDLLSKWYGESEQQIARLFARARAVAPTIIFIDELDSLVPARGGGTSGEPQVT
ERVVNTILAEMDGIEEMQSVVVIGATNRPNLIDPALLRPGRLDELIYVSVPNAEGRQRIL
EIQTGKMPLAGDVDLAALAERTDRFTGADLEDLTRRAGLAALKRSMDSDTVTMADFEEAL
KDTRASVTEAMEKDYEKIQGEIKQAAMSVNPIGFFAPGMLKPVRERKHEEVDKE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
ttggcggatgcaccggtaaaagaaaagcaagtcaagctgcaggtcgccaacgcgcgcgcc
gaggaaagcggcggcggggtcgcgcggatttcgcgcgccgcgatggccgaactcggagtg
accgagggcgatattatcggaatcaacggcaagcgcgagaccgcctcgcgcgtgatggca
ccctatgccgaggacgaagggctcgaagtcgtgcgcctcgacggcttgcagcgtgccaat
gccggtgccggtgcgggcgatatggtgacgctgagccgggtagagacgcgccccgcgacg
cgggtcgtgtttgcgccggcgcaggaaaatctccgcctccagggatcggcgaatgcgctg
aagcgcagcttcttcgggcggccgcttgtcgcgggggataccgtcgcgactgcggggcag
cagcgggtgtcggccggcgacatgccgccgcaactccggcagatgctcaacgcgccggcc
tatgccctcgccgaagtacggctgctcgtcgtgtcggcgagccccaagggcgtcgtcttc
atcgacgaaaataccgaagtcgagctgcttcccgaatttcaggagccgcaggattcgcgc
cgcaccgacgtcacctatgacgatctgggcgggctcggcgagacgatcgaccagctgcgc
gagatggtcgagctgccgctccgctaccccgaactgttccgccgccttggtgtcgatccg
ccgcgcggggtgctgttgcacgggccgccgggaacgggcaagacgcggctggcgcgcgcc
gtcgcgaacgaaagcgaggcgcaattcttcctgatcaacggccccgagattatggggtcc
gcctatggcgaatccgaaaagcgcctgcgcgatatcttcgaacaggcggcaaagtcggcg
ccatcgatcctgttcatcgacgaaatcgattcgattgcgccgaagcgcgggcaggtgcag
ggcgaggccgaaaagcggctcgtcgcgcaattgctgacgctgatggacgggctcgaaccg
cgcaccaatctggtcgtcatcgcggcgaccaaccgtcccgacgcgatcgacgaggcgctg
cggcggcccggccgcttcgaccgcgagatcgtcatcggggtgcccgacgaaaagggacgg
cgcgagatattgggtatccacacccgcggcatgccgctgggcgagaatgtcgacctcgac
gaactcgcccggacgaccttcggtttcgtcggcgccgacatggcggcgctgacccgcgag
gcggcgatcgaggcggtgcggcggatcatgcccaagctgaacctagaggaagggacgatc
ccgcccgaggtgctcgacgaactgcgcgtgacgcgcgaggacttcaacaatgcgctgaag
cgcgtccagccctcggcgatgcgcgaagtgatggtgcaggcgccgaaaacgcggtggagc
gacatcggcgggctcgacgcggcgcgcgacaagctgatcgaaggcatcgaactgccgctc
aagaaccccgaggcgttccgccgcctcggcatccgtccggccaagggcttcctgctctat
ggcccgcccggaaccggcaagacgctgctcgcgaaggcggcggcgcgcgaatccgacgcc
aacttcatctcgatcaaatcgtcggacctgctgtcgaaatggtatggcgagagcgagcag
cagattgcgcggctgttcgcccgcgcccgcgcggtggcgccgacgatcatcttcatcgac
gaactcgacagcctcgttcccgcccggggcggtgggacgtcgggcgaaccgcaggtgacc
gagcgtgtcgtcaacacgatcctcgccgagatggacgggatcgaggagatgcagtcggtc
gtcgttatcggcgcgaccaaccgcccgaacctgatcgatccggcgctgctgcggccgggc
cggctcgacgagctcatctatgtttcggtgcccaatgccgaggggcgccagcgcatcctc
gaaatccagaccggcaagatgccgctggccggcgatgtcgatctcgcggcgctcgccgaa
cggacggatcgcttcaccggcgccgatctggaagatctgacgcgccgcgccggactcgcg
gcgctcaagcggtcgatggatagcgacacggtaacgatggccgacttcgaagaagcgctg
aaggacacccgcgcctcggtgaccgaggcgatggagaaggattatgaaaagatccagggc
gagatcaagcaggccgcgatgagcgtcaatccgatcggcttcttcgcgccgggcatgctc
aagccggtccgcgagcggaagcatgaggaagtcgacaaggagtaa
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