Sphingopyxis macrogoltabida 203: LH19_16530
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Entry
LH19_16530 CDS
T04627
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz00300
Lysine biosynthesis
smaz00470
D-Amino acid metabolism
smaz01100
Metabolic pathways
smaz01110
Biosynthesis of secondary metabolites
smaz01120
Microbial metabolism in diverse environments
smaz01230
Biosynthesis of amino acids
Module
smaz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LH19_16530
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LH19_16530
Enzymes [BR:
smaz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LH19_16530
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6278
Motif
Other DBs
NCBI-ProteinID:
ALJ14478
UniProt:
A0AAC8Z2P4
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All DBs
Position
complement(3257821..3259050)
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AA seq
409 aa
AA seq
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MKPHGPIPPGFTADDDGMLMIGSDRAEALVDAAGDTPLFVYDSALLTARVAEWRAAMPDN
VQLHFAMKANPYAPLLAYMARLVDGFDVASGGELKAALASGMAADHISFAGPGKRDRELE
AAIAAGATLNLESAGEAERALSIGARLGVTPKLAVRVNPDFDLKGSGMKMGGGAKPFGVD
ADEVPALVRRLIDAGADWQGFHIFAGSQALDAAAIAETQAQTVALAARLADEAGAVPPLV
NLGGGMGVPYFPGDKAVDAAAVGAALAETLDARDRALEDSRFAMELGRWLVAEAGVYLTR
VVDRKVSHGETFLVTDGGLHHQLAASGNFGTVIRRNYPIAVANRFGGEAVETVSVVGCLC
TPLDRLGDQVALPRADVGDLIAVFQAGAYGASASPATFLGQGPAREMLV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcacggtccgatcccgcccggttttacggccgacgacgacggcatgctgatg
atcggcagcgaccgcgccgaggcgctggtcgatgccgcgggcgacacgccgctgttcgtc
tatgacagcgcactgctgaccgcgcgcgtcgccgaatggcgggcggcgatgcccgataat
gtccagttgcatttcgcgatgaaggcgaacccctatgcgccgttactggcttatatggcg
cggctggtcgacgggttcgatgtcgcgtcgggcggcgagctcaaggcggcgctcgccagc
ggcatggcggcggaccacatcagctttgccgggcccggcaagcgcgaccgtgaactcgaa
gcagcgattgcggcgggcgcgacgctcaatcttgaatcggcgggcgaagcggaacgcgcg
ctgtcgatcggcgcgcggctcggcgtgacgccgaagctcgcggtacgggtcaatcccgac
ttcgatctcaagggatcggggatgaagatgggcggcggcgccaagccgttcggggtcgat
gccgatgaggtgccggcgctggtgcgccgcctgatcgacgccggggccgattggcagggc
tttcatatcttcgcgggatcgcaggcacttgatgccgcggcgatcgccgagacgcaggcg
cagacggtcgcgctggcggcgcggctggccgacgaggccggcgcggtgccgccgctcgtc
aacctcggcggcgggatgggggtgccctatttccccggcgacaaggcggtcgatgctgcc
gcggttggtgcggcgcttgccgagacgctcgacgcgcgcgaccgggcgcttgaggacagc
cgcttcgcgatggaacttggccgctggctcgttgccgaggccggggtttatctgacccgt
gtcgtcgaccggaaggtcagccatggcgagaccttcctcgtcaccgacggcgggctccac
caccagctcgccgcaagcggcaatttcgggacggtgatccgccgcaactatccgatcgcc
gtcgcgaaccgcttcggcggcgaggcggtcgagacggtttcggtcgtcggctgcctctgc
accccgctcgaccgcctcggcgaccaggtcgcattgccgcgcgccgatgtcggcgacctg
attgcggtatttcaggccggtgcctatggcgcttcggcgagcccggcgacttttctcggg
caggggccggcgcgcgagatgctcgtctga
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