Sphingopyxis macrogoltabida 203: LH19_18525
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Entry
LH19_18525 CDS
T04627
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smaz03009
]
LH19_18525
Enzymes [BR:
smaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
LH19_18525
Ribosome biogenesis [BR:
smaz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LH19_18525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ALJ14869
UniProt:
A0AAC9FG40
LinkDB
All DBs
Position
3724247..3725455
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AA seq
402 aa
AA seq
DB search
MSEPKTKLDGATIAEEDDGIRLDRWFKRHRPGTPHALLARWARSGQLTLDGKKADVSDRI
ETGQKLVMPTPPVEAEARPARKGRPLTDADIELATGMVIHRDASAIVLNKLPGLATQGGT
KTEQHVDGLLDALKFDAPVRPKLVHRLDKDTSGALLVARTPRAAAYFAKSFSNRSARKTY
WAIIVGVPDIAQGEIDLPLAKQPGSGGEKMHVHDSGLASKTRYRVIERAGNSAAWVELQP
LTGRTHQLRVHMAAIGHPIVGDGKYGGKGAFLTGSISRKMHLHSRRLRIDHPDGGAIDIS
AEVPEHFAASLDALGFDLLLGEVGIDDIVKGPPSKAAEKAAAKAHSKQIRKARRGERRGR
TSTSKPTDHVGKPKPKPKAKTGKPAGRKPAAKKPSPRPARPR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcccaagacaaaactcgacggcgcgacgatcgccgaagaagatgacggcatc
cgcctcgaccgctggttcaaacggcaccggccgggaacgccgcacgcgctgctcgcgcgc
tgggcgcgttcggggcagttgacgctcgacggcaagaaggccgatgtgtcggaccgcatc
gagacgggacagaagctcgtcatgccgaccccgccggtggaggccgaggcacgcccggca
cgcaagggccgcccgctgaccgatgccgacatcgagctggcgaccggcatggtgattcac
cgcgacgcgagcgcgatcgtgctcaacaagctgccggggctcgccacccagggaggcacc
aagaccgaacagcatgtcgacgggctcctcgacgcgctcaagttcgatgcgcccgtgcgg
ccgaagctcgtccaccggctcgacaaggatacgtcgggcgcgctgctggtcgcacgcacc
ccgcgcgccgcggcctatttcgccaagagcttttcgaaccgcagcgcgcgaaagacctat
tgggcgatcatcgtcggcgtccccgacatcgcgcagggcgaaatcgacctgccgctcgcc
aagcagcccggctcgggcggcgaaaagatgcatgtccacgacagcggcctcgcctcgaaa
acgcgctaccgcgtcatcgagcgcgccggcaacagcgcggcgtgggtcgaactgcaaccg
ctcaccggccgcacgcaccagcttcgcgttcatatggcggcgatcggccacccgatcgtc
ggcgacggcaaatatggcggcaagggcgccttcctgaccggctcgatcagccggaagatg
cacctgcacagccgccgcctgcgcatcgaccatcccgacgggggcgcaatcgatatcagc
gcggaagtacccgagcatttcgccgcgagcctcgacgcgctcggtttcgacctgctgctc
ggcgaggtcgggatcgacgatatcgtcaagggcccgccctccaaagcggccgaaaaggct
gcggcgaaggcgcacagcaagcagattcgcaaggcacggcgcggcgaaaggcgcgggcgc
acctcgacgagcaaaccgaccgaccatgtcggcaagcccaaacccaagcccaaggcaaaa
accggcaagccggcgggcaggaaaccggccgccaaaaagccttcgccgcgtccggcacgg
ccacgctga
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