Sphingopyxis macrogoltabida 203: LH19_18780
Help
Entry
LH19_18780 CDS
T04627
Name
(GenBank) helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_18780
Enzymes [BR:
smaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH19_18780
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LH19_18780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ALJ14920
UniProt:
A0AAC9AWP7
LinkDB
All DBs
Position
3778175..3781144
Genome browser
AA seq
989 aa
AA seq
DB search
MVDAKPDVFSIPVHRAFADALVAGLIARFADGALGLAEGLILLPSNRAKSAVQAAFVRAG
GAGLLMPRLAVIGDADLDESIGIALDAIDAAEPIAPAIDTLRRRLLLADLIERHTPTGEA
PIRGAAAFQLADGLARAIDQLHYEEVPVSALVDLDLGAFAGHWQASLARLRILVDHWPAV
LAATGHIDRAARRNRLLERVTAAWRTAPPAPFVIAAGITTAAPAIARLLRTVADLERGMV
VLPGVDCGMAAAEWDALGPTRLDPGDPARPIETHPQYHLKLLLDRMGVAREEVLAWDAGS
DFDGPAARAAFVSLLFAPADFTGQWQTAGDLSAATAGIAGAVFADDGQEAQGIALLMREA
VETPGRTAALVTPDRGLAERVAAALSRWDINVDDSAGQPLSRTPPGALLLLLAELAAGFD
PVALIALLGHPLVRKGEGRTAWLDQVRRLDLVLREPGLAPGWDGVSARIAARAADPKARG
HALAAELAPWWDELSALGAALAPFAAGPTPPATLLAALQDALEWLSGDAVWTGPAGRTLA
ELFDQWTLARGDGPALVDPAEFPAMLEQLLTQASVRPPYGGHPRLFIWGLLEARLQRADL
MILGGLDEGRWPAATQPDPWLAPGIRRLLGLPAPERHQGMAAHDFAGALGAREIVVTRAA
RSGGDPVVASRFWLRLSALAGDLPEPAPGGVPLTRLAAMLDVPPGDARPATRPAPRPPAD
ARPRRISVTGVDRLARDPFAFYADRMLGLSALDPLSAAPDPRWRGTRVHKLFEDWVRGGA
TRDGFEAELAALGADPALDEIARAFWLPRIEPALRWAAAQVWNAEGRAPLAVEASGEIVV
DGLTLHGKADRIDRTDSGALAIVDYKSGGAPSAKAAFDKLDSQLGLLGLIAQRGGIKDIA
AASVDALEYWSLRPDRRAGGAGKISNTYGSRSDLKSAEQAIDHASDALAELAALYLFGDA
PFVPGDMRGYGDYDQLMRRDEWFGRGEAD
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgccaaacccgacgtcttctctatcccggtccatcgggccttcgccgacgcg
cttgtcgccgggctgatcgcgcgctttgccgatggcgcgctggggctcgccgaggggctc
atcctgctgccgagcaaccgcgccaagagcgcggtgcaggcggcgtttgtccgcgccggc
ggcgccgggctgctgatgccgcggctggcggtgatcggcgacgccgacctcgacgaatcg
atcgggatcgcgctcgatgcgatcgacgccgccgagccgatcgcgccggcgatcgatacg
ctgcgccgccgcctgctcctcgccgatttgatcgagcggcatacgcccacgggcgaagcg
ccgatccgcggcgcggcggcgttccagctcgccgatgggctggcgcgcgcgatcgaccag
ctccattatgaggaggtgccggtatcggcgctcgtcgacctcgacctcggcgccttcgcc
ggtcactggcaggcgtcgctcgcccggctgcgtatccttgtcgaccattggcccgcggtg
ctcgcggcgaccggccatatcgaccgcgcggcgcggcgcaaccggttgctcgaaagggtg
acggcggcgtggcgcaccgcgccgcccgcgcccttcgtgatcgcggcggggatcaccacc
gccgcgcccgcgatcgcacggttgctgcgcaccgtcgccgatctggagcgcgggatggtc
gtgctgcccggcgtcgattgcggcatggcggcggcggaatgggacgcgctgggcccgacg
cggctggaccccggcgatccggcgcgcccgatcgagacgcacccgcaatatcatctgaag
ctgctgctcgaccggatgggggtggcgcgcgaggaggtcctggcgtgggacgcggggtcg
gatttcgacgggcccgcggcgcgcgcggcgttcgtctcgctgttgttcgctcccgccgat
ttcaccggccagtggcagacggcgggcgacctgtcggcggcgaccgccgggatcgcgggg
gccgtcttcgccgacgacgggcaggaggcgcaggggatagcgctgctgatgcgcgaggcg
gtcgagacgccggggcgcaccgcggcgctggtgacccccgaccgcgggctggccgaacgc
gtcgcggcggcgctctcgcgctgggatataaacgtcgacgacagcgccgggcagccgcta
tcgcgcaccccgccgggggcgctgttgctgctgcttgccgaactcgccgcaggcttcgac
ccggtggcgctgatcgcgctgctcggccacccgctggtgcgcaagggcgaagggcggacg
gcgtggctcgatcaggtgcggcggctcgacctggtcctgcgcgagcccgggctggcgccg
ggttgggacggggtgtcggcgcggatcgcggcgcgcgccgccgatccgaaagcgcgcggg
cacgcgctggcggcagagctggcgccgtggtgggacgaattgtccgcgctcggcgcggcg
ctggcgccgttcgcggcggggccgacgccccccgcgaccttgctcgccgcgctgcaggac
gcgctcgaatggctgagcggcgacgcggtctggacggggccggccggacggacgctcgcc
gagctgttcgaccagtggacgctcgcgcgcggcgacggtcccgcgctggtcgatcccgcc
gagtttcccgcgatgctggagcagcttctgacgcaggcgagcgtgcggccgccctacggg
gggcatccgcgcctgttcatctgggggctgctcgaggcgcggttgcagcgcgccgacctg
atgatcctcggcgggctcgacgaggggcgctggcccgccgcgacgcagcccgacccgtgg
ctcgcgcccggtatccgccgcctgctcggcctgcccgcgcccgaacggcatcagggaatg
gccgcgcacgacttcgccggggcgctcggcgcgcgcgagatcgtcgtgacgcgcgcggcg
cggagcggcggcgatccggtcgttgcgtcacgcttctggctgcggctgtcggcgctcgcc
ggcgacctgcccgaaccggcgccgggcggggtgccgctgacccgcctcgccgcgatgctc
gacgtgccacccggcgatgcgcgcccggccaccagacccgcgccgcgtcccccggcggac
gcgcggccgcggcggatcagcgtcaccggagtcgaccggctcgcgcgcgatcccttcgca
ttctatgccgaccgcatgctcggcctgtcggcgctcgacccgctgagcgccgcgcccgac
ccgcgctggcgcgggacgcgcgtccataaattgttcgaggattgggtgcgcggcggcgcg
acgcgcgacggcttcgaggccgaactcgccgcgctcggcgccgacccggcgctcgacgag
atcgcgcgcgccttctggctgccgcgcatcgagcccgcgctgcgctgggcggccgcacag
gtctggaacgccgaaggacgcgcgccgctggcggtcgaggcgtcgggcgagatcgtcgtc
gacggcctcaccctgcacggcaaggccgaccgcatcgaccggacggacagcggcgccctt
gcgatcgtcgattataaatcgggcggtgcgccgagcgcgaaagcggcgttcgacaagctc
gacagccagcttggcctgctcggcctgatcgcgcagcgcggcggcataaaggatattgcc
gcagcatcggtcgatgccctcgaatattggagcctgcgtcccgaccgccgcgccggcggc
gccgggaaaatctctaacacctatggttcgcggagcgacctcaagagcgccgagcaggcg
atcgaccatgcgagcgacgcgctcgccgaacttgcggcgctctatctgttcggcgacgcg
cccttcgtgccgggcgatatgcgcggctatggcgattacgaccagttgatgcgccgcgac
gaatggttcggccggggcgaggcggactga
DBGET
integrated database retrieval system
