Sphingopyxis macrogoltabida 203: LH19_18785
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Entry
LH19_18785 CDS
T04627
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_18785
Enzymes [BR:
smaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH19_18785
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LH19_18785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ALJ14921
UniProt:
A0AAC9AWI3
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All DBs
Position
3781144..3784611
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AA seq
1155 aa
AA seq
DB search
MAKPSGLAELDPRQGAAADPESHVWLGASAGTGKTQVLSARVLRLMLDGVSPEAILCITF
TKAGAAEMAHRIHERIAAWVRMDDGDLRLDLRALGLDWDRPGLMKRARSLFATVIDSPGG
AIRVQTIHAFCQTLLASFPLEAKLLPGFRAIEEDEAAALQRQVLGELLRGDEAELRDVAA
MLSRRLGQDAALSFLSSCAAAFGGPRAMLPPAAHDLRAAFDLPGGDPDAWVAGEIAAGAI
GDEDIKAVATSGAAWGTKTGEACSDFMVGWLIADTAGRAAMLPELLGRFLTGKGELRADF
AGDKGKMTDCVDSAVRIVDAAQALLATATAMRVADELAAAWKLGSRFAEAYALAKREAGL
ADFDDLITLAGSLLRISSFGEWVRFKLDQRTDHILVDEAQDTNMRQWGIVLSMAEEFFAG
VGAKDERIRTLFTVGDRKQAIFGFQGTEPKAFATARDMFHAMGEIGGQPFQQVDLVSNYR
STPAVLAVADAWLAAGGAAAMGLDGDEPPHHPFRSSHAGQVELWAPLPVGKALDAEAEEA
EGDEGGADSGTPASDPASMRLARAIAGEVQDWIANGKDGRPVSPGDIMILVRRRRDLAAR
IVARLQALHVPVAGVDRFTLTQPLAVQDLLAAMRFAVQPLDNLNLAALLVSPLIGWTQDE
LYAHTHGRGRAALWEHLRATEGDIPAATMAALRHLLGMADLTTPFRFLETILSGPIDGRR
KLYARLGREARDPVDELLGQALSFEQRETVSLLGFLTAVESSGADIKRQTEARSDVVRVM
TVHGSKGLQAPIVILADATDDPGIGHRPFTVDVAAWEKLPVFAVPDDERHGALAKAYQDA
ADAASQEHWRLFYVAMTRAEEILVVAGTTKKPDRSIPEASWHGAVEAVLSDMGSAWEEAG
PVWGQRRVHRANAGKWAKKEKTAKAAPPPLVLPEWAHRPAPEEARPPRPLAPSALGEDDV
AVAPQGVARAAAAERGVWLHALFERLPPVAADRRRDAARRWLAAQAPGLDDTQRAAMADE
VLAVIEDPAHAALFGPGSLAEVPLSAVVDGMVVAGIVDRLLVTADAVTVIDYKTGRRLPD
SAEAVAPAYLRQMAAYRDALRAIFPGRRVDAALLYTAAPRLIALDDALLDAHKPGLAATK
ANLPGSTLEPGAPTP
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccctccggcctcgccgaactcgacccgcggcagggcgccgccgccgacccc
gaaagccacgtatggctgggcgcgtcggcgggcacgggcaagacgcaggtgctgtcggcg
cgggtgctgcggctgatgcttgacggcgtgtcgcccgaggcgatcctctgcatcaccttc
accaaggcgggcgcggccgagatggcgcaccgcatccacgaacggatcgcggcgtgggtg
cggatggacgatggcgacctgcggctcgaccttcgggcgctggggctcgactgggaccgg
ccggggttgatgaagcgggcgcgatcgctgttcgccacggtgatcgacagccccggcggc
gcaatccgggtccagacgatccacgccttctgccagaccctgctcgcgagcttcccgctc
gaagcgaagctgctgccgggcttccgcgcgatcgaggaggatgaagcggcggcgctgcag
cggcaggtgctcggcgaactgctgcggggcgacgaagcggaattgcgcgacgtggcggcg
atgctgtcgcggcggctggggcaggatgcggcgctgtccttcctgtcgagctgtgccgcg
gcgttcggcgggccgcgcgcgatgctgccgcccgccgcgcatgatttgcgggcggcgttc
gacctgccgggcggcgaccccgatgcgtgggtcgcgggcgagatcgccgcaggggcgatc
ggcgacgaagatatcaaggcggtcgcgacaagcggcgcggcgtggggaacgaagacgggc
gaggcctgttcggacttcatggtcggctggctgatcgccgacaccgccggtcgcgccgcg
atgctgcctgaactactcggccgttttctgaccggcaagggcgagctgcgcgccgacttc
gcgggcgacaagggcaagatgaccgattgcgtcgacagcgcggtgcgcatcgtcgatgcg
gcgcaggcgctgctcgcgaccgcgacggcgatgcgcgtcgccgacgagctggcagcggcg
tggaagctgggcagccgtttcgccgaagcctatgcacttgccaagcgcgaggcggggctc
gccgatttcgacgacctgatcacgctggcaggaagtttgctgcggatcagcagcttcggc
gaatgggtgcgcttcaagctcgaccagcgcaccgaccatatcctggtcgacgaggcgcag
gacaccaatatgcgccagtggggcatcgtgctgtcgatggccgaggaatttttcgccggc
gtcggcgcgaaggacgagcgcatccggacgctgttcaccgtcggcgaccgcaagcaggcg
atcttcggtttccagggcaccgagcccaaggcgttcgcgaccgcgcgcgacatgttccac
gcgatgggcgagatcggcggccagccgttccagcaggtcgatctcgtctccaactatcgt
tcgaccccggccgtgctcgcggtcgccgatgcttggctcgcggcgggcggcgcggcggcg
atggggctcgacggcgacgagccgccgcaccatccgttccggtcgagccacgccgggcag
gtcgagctgtgggcgccgctgccggtcggcaaggcgctcgatgccgaagccgaagaagca
gagggcgacgagggcggcgccgacagcggcacccccgcgtcggaccctgcctcgatgcgg
ctcgcgcgcgcgatcgccggggaggtgcaggactggatcgccaatggcaaggacgggcgc
cccgtctcgcccggcgacatcatgatcctcgtccgtcgccgccgcgacctcgcggcgcgg
atcgtcgcgcggttgcaggcgctgcatgtgccggtggcgggcgtcgaccgcttcacgctg
acccagccgctggcggtacaggatttgctcgcggcgatgcgctttgccgtgcagccgctc
gacaacctcaatctcgcggcgctgctcgtctcgccgctgatcggctggacgcaggacgag
ctttacgcgcatacgcacggacgcggccgcgcggcgctgtgggaacatctgcgcgccacc
gagggcgatattccggcggcgacgatggcggcgctgcgccacctgctcggcatggccgat
ctcaccacgccgttccggttccttgagacgatcctgtcggggccgatcgacgggcggcgg
aagctgtatgcgcggctggggcgcgaagcacgcgacccggtcgacgaactgctgggtcag
gcgctctcgttcgagcagcgcgaaacggtatcgctgctcggcttcctgaccgcggtcgaa
agcagcggcgccgacatcaagcgtcagaccgaggcgcgcagcgacgtcgtgcgggtgatg
acggtgcacggatcgaaaggcttgcaggcacccatcgtcatccttgccgatgcgaccgac
gacccggggatcggacaccgcccctttaccgtcgacgtcgcagcgtgggagaaacttccg
gtcttcgcagtaccggacgacgagcgccacggcgcgctggccaaggcttatcaggatgcc
gccgacgcggcgtcgcaggaacattggcggctgttctatgtcgcgatgacgcgtgccgag
gaaatcctggtcgtcgcgggcacgacgaaaaagcccgaccggagcatccccgaggcgagc
tggcacggcgcggtcgaagcggtgctgtcggacatgggcagcgcgtgggaggaagcgggg
cccgtctggggccagcgccgcgtccaccgcgccaatgcggggaaatgggcgaaaaaggaa
aagaccgcgaaggccgcaccgccgccgctcgtcctgcccgaatgggcgcatcgccccgcg
cccgaagaggcccgcccgccgcgcccgctcgccccgtcggcgctcggcgaagacgatgtc
gcggtggcgccgcagggcgtcgcgcgcgccgcggccgccgagcgcggggtgtggctccac
gcgctgttcgagcggctgccgccggtggcggcagaccggcggcgcgatgcggcgcgccgc
tggcttgccgcgcaggcaccgggcctcgacgacacgcagcgggcggcgatggccgacgag
gtgctcgcggtgatcgaggacccggcgcacgccgctctgttcggacccggcagcctcgcc
gaagtgcccttatctgcggtcgtcgacggcatggtggtggcggggatcgtcgaccggctg
ctggtgacggcggatgcggtgacggtgatcgattacaagaccggccgccgcctgccggac
agcgccgaagctgtcgcaccggcctatctgcgccagatggcggcgtatcgcgatgcgctg
cgcgcgatctttcccggccggcgcgtcgatgctgccttgctttacaccgccgcgccgcgg
ctgattgcgctcgacgacgcgctgctcgatgcacacaagccgggcttggcggcaaccaag
gcgaatttgccgggttcgacccttgagcccggggcgccgacgccttag
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