Sphingopyxis macrogoltabida 203: LH19_19195
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Entry
LH19_19195 CDS
T04627
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH19_19195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_19195
Enzymes [BR:
smaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH19_19195
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH19_19195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
ETF
AAA_19
PIF1
Motif
Other DBs
NCBI-ProteinID:
ALJ15003
UniProt:
A0AAC9AWM1
LinkDB
All DBs
Position
3865261..3867429
Genome browser
AA seq
722 aa
AA seq
DB search
MTRARVLLLTAALGPLDYRVPYGSDAPLGSVVVVPLGPRRMGGVVWEDESFGAPEPVGDN
RLRNLFEVVAVPPVPAPLRKLVEWTSDYYLAPPGSVLRMVLPGAAFADARRPIVEYRATG
ELPARMTPQRTVALEKIGARQGIVRELAAMAEVSEAVIRGLVQTGGLEAVSVSADQPYPQ
PDPAFAPPDLSDEQSAAAEQLREAVDAAKFETLLLDGVTGSGKTEVYMEAIAAAIDAGKQ
ALVLLPEIALTEPMLTRFAARFGCEPVAWHSGLRSTERRRAWHSIAAGEAKIVVGARSAL
FLPYGNLGVIVVDEAHETSFKQEDGVHYHARDVAVMRGHFEGLPVILASATPALESLAMV
EAGRYRHIVLPARFGGATLPDLAAIDMRQDPPDRGSWLAPPLVEALADRLHKGEQSLLFL
NRRGFAPLTLCRTCGHRIQCPNCTAWMVEHRLVHRLACHHCGHVMPPPRLCPECEDEDSL
VACGPGVERVADEVALRFPEARVAIVTSDTLWSPAKAAEFVDNVEGGLIDIIIGTQLVTK
GYHFPNLTLVGVVDADLGLDGGDLRASERTFQQIAQVAGRAGRGVKPGAVLIQTRVPDAP
VMAALVANDRDGFYAAEAAARKFAGAPPYGRFAALVISSEDIEVARGQAQRLGQKAPVAE
GLAVYGPAPAPLAMLRGRHRFRLLLHAPRSFDLQGTIREWVNSVDWPSKARLAIDIDPYS
FV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgcccgcgtcctccttttgaccgccgccctcggcccgctcgattaccgggtg
ccttacggcagcgacgcgccgctcggcagcgtcgtcgtcgtgccgctcggcccgcgccgg
atgggcggcgtcgtgtgggaggacgaaagtttcggcgcgcccgagccggtcggcgacaat
cgcctgcgcaacctgttcgaggtcgtggcggtgccgccggtccccgccccgctgcgcaag
ctcgtcgaatggacgagcgactattatctcgcaccgccgggatcggtgctgcgcatggtg
ctgcccggtgccgcctttgccgatgcacggcgtccgatcgtcgaatatcgcgccaccggc
gagctcccggcgcggatgacgccgcaacgcaccgtcgcgctcgaaaagatcggcgcgcgg
caggggatcgtacgcgaactcgcggcgatggccgaggtcagcgaggcggtgatccgcggg
ctcgtccagacgggcgggctcgaagcggtgagcgtgtcggccgaccagccctatccgcag
cccgatccggcctttgcgccgcccgacctgtccgacgaacaatccgctgccgcagagcag
cttcgcgaggcggtcgatgccgccaagttcgagacgttgctgctcgatggcgtcaccggg
tcgggcaagaccgaagtctatatggaggcgatcgccgccgcgatcgacgcgggcaagcag
gcgctcgtcctgcttcccgaaatcgcgctgaccgaaccgatgctgacgcgctttgccgcg
cgtttcggctgcgaaccggtcgcctggcattcgggcctccgctcgaccgaacgccgccgc
gcctggcacagcatcgcggcgggcgaggcgaagatcgtcgtcggcgcgcgatcggcactg
ttcctgccctatggcaatctcggcgtcatcgtcgtcgacgaggcgcatgagacgagcttc
aagcaggaggacggcgtccattatcacgcgcgcgacgtcgcggtgatgcgcgggcatttc
gaggggctgccggtcatcctcgcgagcgcgaccccggcgctcgaaagcctcgcaatggtc
gaggcggggcgctatcgtcatatcgtcctgcccgcgcgcttcggcggcgcgaccttgccc
gatctcgcggcgatcgacatgcggcaggatccgcccgaccgcggaagctggctcgccccg
ccgctcgtcgaggcgctcgccgaccgattgcacaagggcgagcagagcctgctgttcctc
aaccgccgcggctttgcgccgctgacgctgtgccgcacctgcggccaccgcatccagtgc
ccgaactgcaccgcatggatggtcgagcaccggctcgtccaccgcctcgcctgccatcat
tgcggccatgtcatgccgccgccgcggctctgccccgaatgcgaggacgaggacagcctc
gtcgcgtgcggccccggcgtcgagcgtgttgccgacgaggtcgcgctgcggttcccggag
gcgcgcgtcgcgatcgtcacctcggacacgctctggtcgccggcgaaggcggcggagttc
gtcgacaatgtcgagggcggccttatcgacatcatcatcggcacccagctcgtcaccaag
ggctatcatttcccgaacctgacgctcgtcggcgtggtcgatgccgacctcggtctcgac
ggcggcgacctgcgcgcctccgaacgcactttccagcagatcgcgcaggtcgcgggacgc
gccgggcgcggggtgaagccgggcgcagtgctgatccagacccgcgttcccgacgcgccg
gtgatggcggcgctcgtcgccaacgaccgcgacggtttctatgcggcggaggccgcggcg
cgcaaattcgccggcgcgccgccctatggccgcttcgccgcgctcgtcatttcgtcggag
gatatcgaggtcgcgcgcgggcaggcgcagcggctgggccagaaagcgccggttgcggaa
ggcctggcggtctatggccctgcccccgcgccgctcgcgatgctgcgcggccgccaccgc
ttccgcctgctcctccacgcgccgcgcagcttcgatctgcagggaacgatccgcgagtgg
gtgaacagcgtcgactggccgtcgaaggcgcgtctcgcgatcgatatcgatccttatagt
ttcgtctga
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