Sphingopyxis macrogoltabida 203: LH19_22255
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Entry
LH19_22255 CDS
T04627
Name
(GenBank) outer membrane autotransporter barrel
Organism
smaz
Sphingopyxis macrogoltabida 203
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
ALJ15606
UniProt:
A0AAC9AYF8
LinkDB
All DBs
Position
complement(4475473..4481658)
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AA seq
2061 aa
AA seq
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MTTKSTSRARRFAKGALLVSAAFPISALVIAGSAHAEQTVEVNGAEAAVSVQAKIDAAKA
TPDRDITISVTSKGEVTGPGTIGITPIAGQGDGAIGFSNAGSIGATDATGAVTDNVGVVL
NGSSSKADNKLAASNAGLITGGFSATGFGGTVSLDNSGAIHNGVTLAGKGDVSLASSGSV
RSGDVLVAAAGTQTTTVAGDTTTNGFASGDVAAAVANIASADGKTKGNATFYSEYGNVDA
TVSGTAGNIVGYSGGTRTVVATSVAPPAGKTTVTNDYSDTYGATNVNLTTTSTSAVDDIV
GVANGNVEVAVAGSVENNVQAVPLGNNSFATKTTVTLDDKGGLLEEVQTSGGGAVAGNST
IDIAATGKVGGFARAVATRDASISNAGEVEGALNAFAGNGGLTSSNSSTRTEDGLGGVLK
NVTANSLTSAIGSASVSVAGTGVVGGGVQASGTKDATVVNAGAIDGSVTASAGTGNATTS
SQELVFDGKGNILSNATTSTSTRTAGNASIDITETGKVGGNVVATASNSASVVNAGAVEG
SATVNAGTGGSAYANERLVSYDGKGSQISDVYSESSTHLAGDASVDVAATGSIGGAVNAT
ATENVTIVNAGMIGSGVNASSSGSDTTYSYSEQTPTPVVDAKAGTTTSQYSVTSESTATA
TTGAIDFTNSAGGTVGFNGVGNVNLTAGGDITILNQGDVRGATYAQSTGGKSVSSSSYST
TSIDDGKGGSSFTEQGTQSTSYVSTGGSVTGTYAGANGTLNFSPAAIGNVTQVADQASTV
TITGAVLGNVSSVAGNAGVASSSSETSGKGTTIVDVDGTGSFTGGYSESSETTAISGGDS
KVVVSGKVARSNAGGSAGVYSQGTNSSTVAISGSVEDDVASNATGATANVTEESGSVAQT
ITEGVYVTDTLAGKYSSTSVVTDGASSVTITGKATANQDTVGGNVDVNGVKSASAEVASK
AVVGGNLTVNAANGTDSQTTLERSYVRDAETGVATATETQSVSYGASAAQGDASATIAGA
VEGGTYVTAGRGDATVTLTGVSEDYVSAVASGSVTSVEIERTWTGKSDSASDNFGTLVGS
LAGRTLEESVTTETTAVGGKASVLVDSAQALKDKAVSATESVYAFGIEGATVTVTAGSII
DGSVEAQSAAFNTVQTSTKSDDGKGTVNLSSTTTTTIVGGPAVVSNAGIITEDVSAISAT
SATVTNTGRIGDADSVDDVLASAIVIGSNSSSETTNFGKASLQTVTETFTPVVALGKASV
TNAPGAVIVGNVAIEGGEGTLTNNGTIGGTTIFGRNIDTASVTEVRTDTTTETSYAPGAE
LLAQTYTANQNGVSGGFVVTGGLDNDPTGEGAVKTSDVNATINLNSGSATLGSIFGEIDE
DGNRTTNTTVNLNGSGFLGADAILYPNQKWPVGSDKPNQVLSLGKDAQELFGGSNYQVRV
IGIETLNKEGAGTFVINGAEYVPAVPGGEPIYTLDVGNFNIKAGEVQLTTSDFEGAEFGI
RGNVNNAATLVIGRRITPGQNLFGNNLVGQTELIDGITVNQVGNFNQTATGTTVVGITPT
LVRVYRSEVSDGSVLPEPLGPVVGGVYVGYFTTPELAGIDVDPSQVNITGDLNLAGTVAV
NVYRDSLYADGDGYTLFTYTGTGAVSADATPTLTSPYVGFELVHDAATKEVRLEVTRSSY
TAGATNPNAQAAAAGLDSALASAVTRIRTDAAGGAGFGSVTELGYAQDIANVATALDFRL
SGDQAAQLFNELSSGEVYGSLAAVDQNGVFGQTLDMLTNRRSFGGDFATQLWLNPVGRWG
KYGDGDAFGASDIRANSYGLAGGLDFAYAPDGAFGFGGAYAEHDIAARGTPEAVDGRTWT
VGAYVTQGFGPIYANAKVAFGWTNYDVTRKMSLLARTAEASVNAKQLDASLELGYDYRAG
SLTVTPYGKLVLRRSSLEGFTETGAGAFSLDVEGRKKTVFSPVIGVKIGTETELSDTVTL
RPFARASYTFQGNLPNDVSVRYVGGGDSFVLRGVEPDSFGAVEAGFEAKMAERLNLFFSG
SQTFGGDNKVTGLRGGVTFQF
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatccacttctcgggcacgtcgctttgcaaaaggcgctctgcttgtttcc
gcggccttcccgatttcggcgcttgttatcgcgggcagcgcccacgccgagcagacggtc
gaagtgaatggtgccgaagcggcggtcagcgttcaggccaagatcgatgcagccaaggcg
acgcccgatcgcgatatcacgatctcggtgacctcgaagggcgaagtgaccggtcctgga
acgatcggcatcacgcctatcgctgggcaaggcgatggcgcaatcggcttcagcaacgct
ggcagcatcggcgcgaccgacgcgaccggggccgtgactgacaatgtcggggtcgtgttg
aacgggtcttcctccaaggcagataacaagctcgcagcaagcaacgccggcctgattacc
ggtggcttttcggcgaccggatttggcgggaccgtgtcgcttgataacagcggcgcgatc
cacaatggcgtgacgctcgccggcaagggcgacgtttcgctcgcctcttcagggtcggtg
cgttcaggcgatgttctcgtcgcagctgcgggcacgcagacgacgaccgtggccggcgac
accacgaccaacggcttcgccagcggcgatgtggccgcggcagtggccaacatcgccagc
gccgacggcaagacgaagggcaatgcgactttctattccgaatatggcaatgtcgacgcg
actgtctcgggcacggctggtaacatcgtcggctattcgggcgggacgcgcacggtcgta
gctacgagcgtagcgccgccggccggaaagacgacggtcaccaacgactatagtgacacc
tatggtgcgacgaacgtcaatctcacgaccacaagcacgagcgcggtggacgatatcgtc
ggggtggccaacggtaatgtcgaagtcgcggtggctggaagcgtcgaaaataatgttcag
gcggttcctcttggcaataacagcttcgcaaccaagaccaccgttaccctcgacgacaag
ggcggcttgctcgaggaggtccagacgtccggcggcggcgccgtcgcgggcaattcgacc
atcgatatcgccgcgaccggaaaggtcggaggtttcgcgcgcgcggtagcgacgcgggac
gcgtcgatcagcaacgccggtgaggtagaaggcgcgcttaacgcattcgctggcaatggc
gggctgacgagcagcaatagcagcacccggaccgaggacgggcttggcggcgtgctcaaa
aatgtgacggcaaattcgctgaccagcgcgatcggtagcgcatcggtgagtgtcgctggc
actggtgtggtcggcggcggcgtgcaggccagcggcaccaaggacgcaacggtggttaac
gccggtgccatcgatggttcggtgaccgcaagcgcgggcaccggcaacgccacgacgtcc
agtcaggaactggtcttcgacggcaagggcaacattctcagcaacgcgacgacgtcgacc
agcacccggaccgcgggcaatgcgtcgatcgatatcaccgaaaccggcaaagttggcggc
aatgtcgtcgccacggcgtcgaacagcgcatcggtcgtcaacgccggcgccgttgagggg
tcggctacggtcaatgcgggcaccggcggctcggcctatgcgaacgaacggctcgtcagc
tatgacggcaagggaagtcagatcagcgacgtctatagcgaaagctcgacccacctcgct
ggtgacgcaagcgtggatgtcgccgcgaccggctcgatcggcggcgcggtcaatgctacg
gcgacggaaaatgtcacgatcgtcaacgctggcatgatcggcagcggcgtgaacgcttcg
tcgtcgggtagcgacacgacctacagctattccgagcagacgccgacacccgtggtcgac
gcgaaggcggggacgacgacaagccaatattcggtgacttcggaatcgaccgcaaccgca
accaccggcgcgatcgactttaccaattcggctggcggaaccgtcggcttcaatggcgtt
ggcaacgtcaacctgaccgccggcggggacatcacgatcctgaaccagggcgatgtccgc
ggtgccacctatgcgcaaagcactggcggcaagtcggtgagcagctcgtcctacagcacg
accagcatcgacgatggcaagggtggtagcagcttcaccgagcagggtacgcaaagcacc
tcctatgtgtcgacgggcggcagcgtgaccggcacctatgccggtgcgaacggcacgctg
aatttctcgccggccgcaatcggtaacgtcacccaggtcgccgatcaggcgagcacggtg
acaatcaccggtgcggtgctcgggaatgtgagctcggttgctggtaatgcaggcgtggcg
agttcttcgtctgaaaccagcggcaagggcacgacgattgttgacgtcgacggcacgggt
tccttcactggtgggtatagcgaaagctccgagacgaccgcgatcagcggtggcgacagc
aaggtcgtagtgtccgggaaggttgcgcgcagcaacgctggcggttcggcgggtgtctac
tcgcagggaaccaactcgtcgactgtggcgatcagcggctcggtcgaggacgatgtggcc
agtaatgcgactggcgcaaccgcgaacgtgaccgaggaatcgggcagcgtcgcccagacg
atcaccgagggcgtctatgtgaccgacacgctggccgggaaatacagcagcacgtcagtg
gtcaccgacggtgcgagctcggttacgattaccggcaaggccaccgcgaaccaggatacg
gttggcggcaacgtcgatgtgaatggtgtcaaatccgcatcggccgaggtcgccagcaag
gcggtcgtcggcggtaacttgactgtcaacgccgctaacggcaccgacagccagacgact
cttgagcgcagctatgtacgtgatgccgagacgggtgtcgcaacggctaccgaaacgcag
agtgtttcctacggtgcctccgcggcacagggtgatgcgtcggcaacgatcgcaggagcc
gtcgaaggcggcacctatgtgacggctggtcgcggcgatgcgacggtcacgctcacgggt
gtgtcggaagactatgtctccgctgtcgcctcggggagtgtcaccagcgtcgagatcgag
cggacatggaccggtaaatccgattcggcgtcggataacttcgggacgctggtcggcagc
ctggctgggcgcacgctcgaagaaagcgtgacgaccgagaccacagccgtcggcggcaag
gcaagcgtgcttgtcgattcggcgcaggcgctcaaggacaaggccgtctcggcaaccgaa
tcggtctatgctttcggcatcgagggcgcgacggtcacggtgaccgcaggttcgatcatc
gacggcagtgtcgaagcgcagagtgctgccttcaatactgtccagaccagcaccaagagc
gatgacggcaagggaacggtaaatctgtcgagcacgacaacgacgacaattgtcggcggt
ccggcagtcgtcagcaatgccggcatcattactgaagatgtcagcgccatcagcgcgacg
tcggctacggtgaccaacaccggacggatcggcgatgcggactctgtcgatgacgtcttg
gcctcggcgatcgtgatcggctcgaattcgagcagcgaaacgacaaacttcggcaaagca
tcgctgcagacggtgaccgaaactttcactccggtcgtcgcgctcggcaaggccagcgta
acgaacgcgccgggtgcggtcatcgtcggcaatgttgccatcgaaggcggcgagggtacg
ctgacgaacaatggcacgattggcgggaccacgatcttcggtcgcaacatcgataccgct
tccgtcaccgaggttcgcaccgacacgacgaccgaaaccagctatgcgccgggcgcggaa
ttgctggcccagacctacacggccaatcagaacggcgtttcgggcggcttcgtggttacc
ggcggtctcgacaacgatccgaccggcgaaggagcggtgaagaccagcgacgtcaacgcg
acgatcaatctgaactcgggttcggcgacgctcggcagcatcttcggcgaaatcgacgaa
gatggtaaccgcaccacaaacaccacggtcaatctgaatggctcgggcttcctcggagcc
gacgccatcctctacccgaaccagaaatggccggtcgggagcgacaagcccaaccaggtc
ctgtccctgggcaaggatgcgcaggagctcttcggcggctcgaactatcaggtccgggtg
atcggcatcgaaacgctgaacaaggaaggtgccggcaccttcgtgatcaacggcgccgaa
tatgtcccggccgtgccgggaggcgagccgatctacacgctcgacgtgggcaacttcaac
atcaaggcgggtgaagtccagctcaccacgagcgatttcgagggcgcggaattcgggatc
cgcggtaacgtcaataacgccgcaacgctggttatcggccgccgcatcacgccgggacag
aatctcttcgggaataacctggtcggacagaccgagctgatcgacgggatcaccgtcaat
caggtcggcaatttcaaccagaccgcgacgggtacgaccgtcgtcgggatcacgccgacg
ctggttcgcgtataccgcagcgaagtcagcgacggctccgtcctgcccgagcccctgggt
ccggtggtcggcggcgtctatgtcggctacttcaccaccccggaactggcggggatcgat
gtcgatccgtcgcaggtgaacattacgggtgacctcaatctcgcaggtacggtggcggtc
aacgtctaccgcgacagcctgtatgccgatggcgacggctatacgctgttcacctacacc
gggacgggtgctgtttcggccgacgccacgccaacgctgacgtcgccctatgtcgggttc
gaactcgtccacgacgcggcgacgaaggaagtccggctggaagtgacccggtcgagctac
actgccggtgcgaccaaccccaacgcccaggcagcggcggctggcctagactccgcgctg
gcctcggcggtgacccgcatccgcaccgacgcggcaggcggcgcaggcttcggctcggta
accgagcttggctatgcccaggatatcgccaacgtcgcgacggcgctcgacttccgcctc
tcgggggatcaggcagcgcagctcttcaacgagctgtcgtcgggcgaggtctacggctcg
ctcgcggcggtcgaccagaacggggtcttcggccagacgcttgacatgctgaccaatcgc
cgttccttcggtggcgatttcgcgacccagctgtggctcaacccggtcggtcgctggggc
aaatatggtgacggcgacgcctttggcgcttcggatatccgcgccaacagctacggtctc
gccggcggcctcgacttcgcctatgcgcccgacggtgccttcggcttcggtggtgcctat
gccgagcatgacatcgccgcgcgcggcacgccggaagcggtcgatggccgcacctggacc
gtcggtgcctatgtcacgcagggcttcggaccgatctacgccaatgccaaggtcgccttc
ggctggaccaactatgatgtgacccgtaagatgagcctcctggctcgaacggcggaagca
tcggtcaatgccaagcagctcgatgccagcctcgaattgggctacgactatcgcgccggc
agcctcacggttacgccctacggcaagctcgtcctgcgtcgttcgtcgctggaaggcttc
accgaaaccggtgcaggcgcgttcagcctcgatgtcgaaggtcgcaagaagacggtcttc
tcgcccgtcatcggcgtcaagatcggaacggaaaccgaactctcggataccgtcacgctt
cgtcccttcgcccgggcttcctacaccttccagggcaatctcccgaacgacgtcagcgtt
cgttatgtcggcggcggagactcgttcgtcctgcgcggggtggagccggacagcttcggg
gcggtcgaagccggattcgaagcgaagatggccgaacgcctcaacctgttcttctccggg
agccagaccttcggcggcgacaacaaggtgacgggtctcaggggcggtgtgacgttccag
ttctga
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