Sphingopyxis macrogoltabida 203: LH19_24225
Help
Entry
LH19_24225 CDS
T04627
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LH19_24225
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smaz01007
]
LH19_24225
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smaz03016
]
LH19_24225
Enzymes [BR:
smaz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
LH19_24225
Amino acid related enzymes [BR:
smaz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
LH19_24225
Transfer RNA biogenesis [BR:
smaz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LH19_24225
Prokaryotic type
LH19_24225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
ALJ15996
UniProt:
A0AAC9AYQ5
LinkDB
All DBs
Position
complement(4907804..4910200)
Genome browser
AA seq
798 aa
AA seq
DB search
MKITLDWLREHLDGDFAVEDVIATLNRIGHEVEGVENPAEKLAGFRVARVLTAEKHPQAD
KLQVLTVDSGPEVNGGIPLTVVCGAPNARAGLVGVLGLPGAVVPANGMELKVAAVRGVES
NGMMCSTRELELGDDHDGIIELPADAPVGTAFADYSGAGDPVIDISITPNRQDCMGVRGI
ARDLAAAGLGTLKPLDVPTIAGEGAPATEIRTDDPEGCPAFYGRTIGGVTNGTAPEWMRR
RLEAVGQRSISALVDISNYVMFDLGRPSHIYDRAKLDGALVARRAKDGEMVTALNGKEYT
LTGTMTVIADGSGVHDIAGIMGGEHSGCSETTTDVLIEIAYFTPERIALTGQALGLTSDA
RSRFERGVDPAFLDDATAIVTGHVLAICGGTPSAITRAGTPPVGTHHIDYDPARAETLGG
IAIDAERQRDILTALGFGIIEQGTHWQVAVPSWRRDMDGAPDVVEEVTRIHGFDAIPSTP
LPRSDGVAKPTATADQLLERRLRRAAASSGFHEAVTWSFVSERDAAPFGGGTWTLANPIS
EDLKVMRPSLLPGLLAAAQRNQHRGADSIRLFEIGRRYLADAERPTLAVLMAGDRSARGW
QTGKAAPFDAFDAKAAALALLEAAGAPADRLQVMEPVAAGQIWHPGQSATLRLGPKAVLA
EFGALHPALTRGFDVDGPVMAVQIFLDAIPAKRASGPARPAFTPPALQSVRRDFAFLAPA
TLAAADLVRAIRAADKASIVEARLFDRFAGQGVPEGQVSLAVEVELQPVEKSFADAELKA
IADKVVAAAAKLGAVLRG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaccctcgactggctccgcgaacatctcgacggcgatttcgccgtcgaggac
gtcatcgcgaccctcaaccgcatcggtcacgaggtggaaggcgtcgaaaatccggccgaa
aagcttgcgggcttccgtgtcgccagggtgctgaccgccgagaagcacccgcaggccgac
aagctgcaggtgctgaccgtcgacagcggcccagaggtgaatgggggtatcccgctcacc
gtcgtctgcggcgccccgaacgcgcgcgccggcctcgtcggcgtgctcggactgcccggc
gcggtcgtgccggcgaacggcatggagctgaaggtcgcggcggtacgcggcgtcgaatcg
aacggcatgatgtgttcgacgcgcgagctcgaactcggcgacgatcatgacggcatcatc
gaattacccgccgacgcaccggtcggcaccgctttcgccgactattcgggtgcgggcgat
ccggtgatcgacatctcgatcaccccgaaccggcaggactgcatgggcgtgcgcggcatc
gcgcgcgacctcgccgccgccgggctcggcacattgaagccgctcgacgtcccgacgatc
gccggcgaaggcgcgcctgcaaccgaaatccggaccgacgatcccgagggctgtcccgcc
ttctacggccgcacgatcggcggcgtcacgaacggcacggcccccgaatggatgcgccgc
cggctggaagcggtcgggcagcgttcgatctcggcgctcgtcgacatcagcaactatgtg
atgttcgacctcggccgcccgagccatatctatgaccgtgccaagctcgatggcgcgctc
gtcgcacggcgcgccaaggatggcgagatggtcaccgcgctcaacggcaaggagtacacg
ctcaccggcacgatgacggtgatcgccgacggcagcggcgtccacgacatcgcgggcatc
atgggcggcgaacatagcgggtgcagcgagacgacgaccgacgtcctgatcgaaatcgct
tattttacccccgagcgcatcgcgctcaccgggcaggcgctcggcctgaccagcgacgcg
cgcagccgcttcgaacgcggcgtcgatcccgccttcctcgacgatgcgacggcgatcgtc
accggccatgtcctcgcgatctgcggcggcacgccttcggcgatcacccgcgccggcacg
ccgccggtcgggacgcaccatatcgattatgatccggcccgcgctgaaacgctgggcggc
atcgccatcgatgccgagcgccagcgggacattctcaccgcgcttggcttcggcatcatc
gaacagggcacgcattggcaggtcgcggtgccgagctggcgccgcgatatggacggcgcc
cccgacgtggtcgaggaagtcacgcgcatccacggcttcgacgcgatcccctcgacgccg
ctgccgcgcagcgacggggtcgccaaaccgaccgcgaccgccgaccagctgctcgaacgc
cgcctgcgccgcgccgcggcctcgtcaggcttccacgaagcggtcacctggtcgttcgtc
agcgaacgcgacgccgcgcccttcggcggcggcacctggacgctcgccaacccgatcagc
gaggatctgaaggtcatgcgcccgtcgctgctccccggcctgctcgccgcggcacagcgc
aaccagcatcgcggcgccgacagcatccggctgttcgagatcggtcgccgctatcttgcc
gacgccgaacgtccgacgctcgccgtcctgatggcgggcgaccgaagcgcgcgcggctgg
cagacgggcaaggccgcacccttcgacgccttcgacgccaaggcggcggcgctggcgctg
ctcgaggccgccggggcccccgccgaccggctgcaggtgatggagcccgtcgccgccggg
caaatctggcatccgggccagtcggcgacgctgcggctcggccccaaggcggtgctcgcc
gaattcggcgcgctccacccggcgctgacccgcggtttcgacgtcgacgggccggtgatg
gcggtgcagatcttcctcgatgcgatcccggcgaagcgcgcgagcgggccggcgcggccg
gcctttacaccgcccgccctgcaatcggtgcgccgcgacttcgccttcctcgcccccgcg
acgctggccgccgccgatctggtgcgcgcgatccgcgccgccgacaaggcgagcatcgtc
gaggcgcggctgttcgaccgctttgccggtcagggcgtgcccgaaggccaggtcagcctc
gcagtcgaggtcgaattgcagccggtggaaaaaagctttgccgacgcggagctgaaggcg
attgccgacaaggtggtcgcggcggcggcaaaactgggggcggtgctgcgagggtaa
DBGET
integrated database retrieval system
