Sphingopyxis macrogoltabida 203: LH19_24925
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Entry
LH19_24925 CDS
T04627
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaz03032
]
LH19_24925
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_24925
Enzymes [BR:
smaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LH19_24925
DNA replication proteins [BR:
smaz03032
]
Prokaryotic type
DNA Topoisomerases
LH19_24925
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LH19_24925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
NQRA_2nd
Motif
Other DBs
NCBI-ProteinID:
ALJ16135
UniProt:
A0AAC9AZ04
LinkDB
All DBs
Position
complement(5044446..5046986)
Genome browser
AA seq
846 aa
AA seq
DB search
MTDTPENIAPTAPANQPNTNAYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEV
SDNAIDEALAGHCDLVLITLNSDGSVSVEDNGRGIPTGIHAEEGISAAEVIMTQLHAGGK
FENTSDDNAYKVSGGLHGVGVSVVNALSEWLELTIWRDGEEHWMRFEHGDSVAPLKVNGP
APAGKKGTRVTFMASTDTFKNVTEFDFEKLEHRYRELAFLNSGVRIKLVDARHAEHQSHD
LFYEGGIAAFVKYLDRNKNALLPDPIAISSERDGIGIDVALEWNDSYYENVLCFTNNIPQ
RDGGTHLAAFRAALTRTLNGYGDKSGILKKEKVSLTGEDMREGLTAIVSVKLPDPKFSSQ
TKDKLVSSEVRQPLESLMADRMTEWLEENPAYAKAVIQKVIDAAAAREAAKKARELTRRK
GAMDIASLPGKLADCQERDPSKCELFLVEGDSAGGSAKQGRDRHVQAILPLKGKILNVER
ARFDRIISSKEVGTLIQALGTGIRDEFNLEKLRYHKIVIMTDADVDGAHIRTLLLTFFYR
QMPEIIEGGHLYIAQPPLYKVAKGRSEVYLKDDTALENYLVDAGIDALLLETPGGARSGA
DLRGLIDHGRRLRALMRYVPRNLNHGLVEALALTGALDPELDTAGRHSAAATSATWLNAA
ERALTGGAEAVWTVEAVEGGGYTLERRWRGVSDHHAIDAGFLASQEARRMHKLAAEQADS
YARPGRLVKATGAVVEVETTEGEEDDAPAAPNAKANPVTRPSELLDAIFAHSRKGLAISR
YKGLGEMNAEQLWETTLDPSNRSLLRVEAEQADVAHEIFERLMGDEVEPRRDFIQTNALS
VANLDV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgacggacacccctgaaaatatcgccccgaccgcgcccgccaaccagcccaataccaac
gcctatggcgccgattcgatcaaggttctgaagggcctcgacgcggtgcgcaaacgcccg
ggcatgtatatcggcgacaccgacgacgggtcggggctgcatcacatggtgttcgaggtc
agcgacaatgcgatcgacgaagcgctcgcgggccactgcgaccttgtcctgatcacgctc
aacagcgacggatcggtcagcgtcgaagataacggccgcggtatccctaccggcatccac
gccgaggaaggcatttcggccgccgaggtcatcatgacccagctccacgccggcgggaag
ttcgagaataccagcgacgacaatgcatacaaggtgtcgggcggcctgcacggcgtcggc
gtcagcgtcgtcaacgcgctcagcgaatggctcgaactcaccatctggcgcgatggcgaa
gagcattggatgcgtttcgaacatggcgattcggtcgcgccgctcaaggtcaacggcccc
gcccccgccggcaagaagggcacgcgcgtcaccttcatggcgtcgaccgacacgttcaag
aatgtcaccgaattcgatttcgaaaagctcgagcatcgctatcgcgaactcgccttcctg
aactcgggcgtccgcatcaagctcgtcgacgcgcggcatgccgagcatcagagccacgac
ctcttctacgaaggcggcatcgcggcgttcgtcaaatatctcgaccgcaacaagaatgcg
ctgctgcctgacccgatcgcgatcagcagcgaacgcgacggcatcggcatcgacgtcgcg
ctcgagtggaacgacagctattatgaaaatgtcctctgctttacgaacaacatcccgcaa
cgcgacggcggcacccacctcgccgccttccgcgccgcgctgacgcgcacgctgaacggc
tatggcgacaagtcgggcatcctcaagaaggagaaggtgtcgctgaccggcgaggatatg
cgcgaaggcctgaccgcgatcgtgtcggtcaagttgcccgatccgaagttcagctcgcag
accaaggacaagctggtcagcagcgaagtccgccagccgctcgaaagcctgatggccgac
cggatgaccgaatggctcgaggaaaatcccgcctatgccaaggcggtgatccagaaggtg
atcgacgccgccgcggcgcgcgaggccgcgaaaaaggcgcgcgagctgacgcggcgcaag
ggcgcgatggatatcgcaagcctgcccggcaagctcgccgactgtcaggaacgcgatccc
tcgaaatgcgaactcttcctcgtcgagggtgactcggcaggcggctcggcgaagcagggc
cgcgaccgccatgtgcaggcgatcctgcccttgaagggcaagattctgaacgtcgagcgc
gcgcgcttcgaccgcatcatctcgtcgaaggaagtcgggacgctcatccaggcgctcggc
accggcatccgcgacgagttcaacctcgaaaaactgcgctatcacaagatcgtgatcatg
accgacgccgacgtcgacggcgcgcatatccgcaccttgctgctcaccttcttctaccgc
cagatgcccgagattatcgagggcggccacctctacatcgcccagccgccgctctacaag
gtcgcgaaggggcgcagcgaagtctatttgaaggacgataccgcactcgaaaattacctc
gtcgatgcggggatcgatgcgttgctgctcgaaacgccgggcggggcgcgctcgggtgcc
gacctgcgcgggctgatcgaccatggccggcgtctccgcgcgctgatgcgctatgtgccg
cgcaacctcaatcacgggctcgtcgaggcgctcgcgctcaccggcgcgctcgatcccgaa
ctcgacaccgcgggccgccacagcgccgcggcaacgagcgcgacctggctcaacgccgcc
gagcgcgcgctcaccggcggtgccgaggcggtgtggaccgtcgaagcggtcgaaggcggc
ggctacacgctcgaacgccgctggcgcggggtcagcgatcatcacgcgatcgacgcaggc
ttcctcgccagccaggaagcgcgccggatgcacaagctcgccgccgaacaggccgacagc
tatgcccgccccggccgactggtgaaggcgaccggcgcggtcgtcgaggtcgaaacgacc
gaaggcgaagaggatgacgcaccggccgcgccgaacgccaaggccaatccggtgacgcgc
ccgtccgaactgctcgacgcgattttcgcgcacagccgcaagggcctcgcgatcagccgc
tacaaggggctgggcgagatgaatgccgaacagctctgggaaaccacgctcgatccgtca
aaccgctcgctgctccgcgtcgaggccgaacaggccgatgtcgcgcacgaaatcttcgag
cggctgatgggcgacgaggtcgaaccgcggcgcgatttcatccagaccaatgctctgtcg
gtcgcgaatctggacgtctaa
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