Sphingopyxis macrogoltabida 203: LH19_25205
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Entry
LH19_25205 CDS
T04627
Name
(GenBank) F-box protein 20
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smaz03016
]
LH19_25205
Enzymes [BR:
smaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LH19_25205
Transfer RNA biogenesis [BR:
smaz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LH19_25205
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
ALJ16188
UniProt:
A0AAC9FHB4
LinkDB
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Position
complement(5103888..5104415)
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AA seq
175 aa
AA seq
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MRARNPLYVMAKPPPEVQAAIAALPRNDPGRGPDLLHVTLISLYDLHYAPPGWLPATIAA
LDGFAAAPFALRFDRFENRKAVTLRTRDPLAGARAFQKALVDHLLREKAPIMDGTTPEPH
ITINYRGDRLGSQTFGALKLPPIEWTVREILLMESVVGKTTHVEHGRWALTLPSH
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcccggaaccccctctatgtcatggccaagccgccgccggaggtgcaggcggcg
atcgccgcgctgccacgcaacgaccccgggcgcgggcccgacctgctccatgtcacgctc
atctcgctctatgacctccattatgcgccgcccgggtggctgcccgcgaccatcgccgcg
ctggacggcttcgccgcggcgcctttcgcgctccgcttcgaccggttcgagaaccgcaag
gcggtgactttgcgcacgcgcgatccgctggccggggcgcgggcgttccagaaggcgctg
gtcgaccatctgctacgcgaaaaggcgccgatcatggacggcaccacccccgaaccgcac
atcacgatcaactatcgcggcgaccggctgggttcgcagaccttcggcgcgctgaaactg
cccccgatcgaatggacggtgagggaaatattgttgatggaaagcgttgtcggcaagacg
acgcatgtcgagcacggccgctgggcgctgacgctgccgagccactga
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