Streptococcus mitis: smi_0048
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Entry
smi_0048 CDS
T01173
Symbol
polI
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
smb
Streptococcus mitis
Pathway
smb03030
DNA replication
smb03410
Base excision repair
smb03420
Nucleotide excision repair
smb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
smi_0048 (polI)
03410 Base excision repair
smi_0048 (polI)
03420 Nucleotide excision repair
smi_0048 (polI)
03440 Homologous recombination
smi_0048 (polI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smb03032
]
smi_0048 (polI)
03400 DNA repair and recombination proteins [BR:
smb03400
]
smi_0048 (polI)
Enzymes [BR:
smb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
smi_0048 (polI)
DNA replication proteins [BR:
smb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
smi_0048 (polI)
DNA repair and recombination proteins [BR:
smb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
smi_0048 (polI)
NER (nucleotide excision repair)
GGR (global genome repair) factors
smi_0048 (polI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Mt_ATP_synt
Motif
Other DBs
NCBI-ProteinID:
CBJ21345
UniProt:
D3H655
LinkDB
All DBs
Position
45740..48373
Genome browser
AA seq
877 aa
AA seq
DB search
MDKKKLLLIDGSSVAFRAFFALYQQLDRFKNAAGLHTNAIYGFQLMLSHLLERVEPSHIL
VAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIRELLDHMGIRHYELAQYEADDIIG
TLDKLAEQDGFDITIVSGDKDLIQLTDEHTVVEISKKGVAEFEAFTPEYLMEKLGITPTQ
FIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEHGSLEGIYENIDGMKASKMKDNLINDKE
QAFLSKTLATIDTKAPIEIGLEDLVYSGPDVENLGKFYDEMGFKQLKQALNVSSADVTES
LDFTIVDQISQDMLSEESIFHFELFGENYHTDDLVGFAWSCGDKLYATDKLELLQEPIFK
DFLEKTPLRVYDFKKAKVLLNRFGVDLQAPAFDSRLAKYLLSTVEDNEIATIASLYGQTY
LVDDETFYGKGVKKAIPEREKFLEHLARKLAVLVETEPILLEKLSENGQLELLYDMEQPL
AFVLAKMEIAGITVKKETLLEMQAENELVIEKLTQEIYELAGEEFNINSPKQLGVLLFEK
LALPLEYTKKTKTGYSTAVDVLERLAPIAPIVKKILDYRQIAKIQSTYVIGLQDWILADG
KIHTRYVQDLTQTGRLSSVDPNLQNIPARLEQGRLIRKAFVPEWENSVLLSSDYSQIELR
VLAHISKDEHLIKAFQEGADIHTSTAMRVFGIERPEDVTANDRRNAKAVNFGVVYGISDF
GLSNNLGISRKEAKAYIDTYFERFPGIKNYMDEVVREARDKGYVETLFKRRRELPDINSR
NFNIRGFAERTAINSPIQGSAADILKIAMIQLDKALVAGGYQTKMLLQVHDEIVLEVPKS
ELAEMKKLVKQTMEEAIQLSVPLIADENEGATWYEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaaaaattattattgattgatgggtcttctgttgcttttcgggcgtttttt
gcactctatcagcagttggaccgttttaagaatgcggctggtttgcataccaatgcgatt
tatggtttccagttgatgttgagtcatttgttggagcgggttgagcctagtcatatttta
gtagcctttgatgcgggaaagacgactttccggacagagatgtatgcggactataagggt
ggtcgggccaagactcctgatgagtttcgtgagcaatttccctttattcgtgagttgctg
gatcatatggggattcgtcattatgagttggctcagtatgaggcggatgacatcattggg
acactggataaactagcagagcaggatggttttgatattaccattgtcagtggggacaag
gatttgattcagctgacggatgagcatacggtggttgagatttccaagaaaggtgtggct
gagtttgaggcctttacgccagaatatcttatggaaaagctgggcattacaccgacgcag
tttatcgatctcaaggcgcttatgggtgataagtcggataatatccctggggtgaccaaa
atcggtgaaaagacgggtatcaagctcttgctggagcatggttcgcttgagggaatttat
gaaaatattgatgggatgaaggcttctaagatgaaggacaatctcatcaatgataaggaa
caggcttttttgtctaaaacactagcgaccattgataccaaggcaccgattgagattggt
ttggaggacttggtctatagtggtccagatgtggaaaatcttgggaaattctacgatgag
atgggcttcaaacagctcaagcaagctttaaatgtgtcgtcagctgatgtgactgagagt
ttggattttactattgttgaccaaatcagtcaagatatgctgagtgaagagtctatcttc
cattttgagctttttggtgagaattaccatacggatgatttggttggttttgcttggtct
tgtggggataagctttatgctacagacaagcttgagctgttgcaagagcctattttcaag
gatttcctagaaaaaacacctctgagagtttatgattttaaaaaggccaaagttcttttg
aatcgttttggtgtggatttgcaggcgcctgcttttgacagccgtttggctaaatacctc
ctttcgactgtggaggacaatgaaattgcgaccatcgctagtctttatggtcagacttat
ttggttgatgatgagaccttctatggtaagggagtcaagaaggccattcctgaacgcgag
aaattcttggagcatttagctcgtaagcttgctgttttggttgaaacagagcctatttta
cttgaaaaactcagcgaaaatgggcaattagagcttctttatgatatggaacaacctttg
gcttttgtccttgctaagatggaaattgctggtattacggtcaagaaagagaccttgctt
gagatgcaggctgaaaatgagcttgtcattgaaaaactcactcaagagatttacgaactg
gctggtgaggagtttaatatcaactcgcctaagcagttgggggtacttctctttgaaaaa
ttggctcttcctctagaatacactaagaaaaccaagacaggttattcgacagccgtggat
gtcttggagcgcctggctcctattgcgccgattgttaagaaaatcctagactatcgtcag
attgctaagattcaatctacttatgtaattggcttgcaggactggattttggctgatggc
aagattcatactcgttatgtgcaggatttgacccagactgggcgtctgtctagtgtggat
ccaaacttgcaaaatattcctgctcgattggaacaagggcgcttgattcggaaggctttt
gttccagagtgggagaatagtgtccttctcagctcggactactcacagattgaattgcgc
gttttggcgcatatttctaaggatgagcacttgattaaggccttccaagagggggcagat
atccatacttcgacagccatgcgggtctttggcattgaacgtcctgaggatgtgactgca
aacgaccgtcgcaatgccaaggcggtcaactttggagtggtttacgggatttcagacttt
ggtttgtctaataatctgggcattagccgtaaggaggccaaagcctacattgatacctac
tttgaacgcttcccaggtattaaaaactacatggatgaagtggtgcgtgaggcgcgtgat
aagggctatgtagagacacttttcaagcgtcgtcgtgagttgccagatatcaattcgcgc
aactttaatattcgtggtttcgcagagcggacagctatcaactctcctatccagggttcg
gcagcagatattctcaagattgccatgatccagttagataaagccttagttgcaggtggt
tatcagactaagatgcttctgcaagtgcacgatgaaatcgtccttgaagttcctaaatct
gaattggcagagatgaaaaaattggtgaaacaaaccatggaagaagccattcaactcagt
gttcccctcatcgcagatgagaatgagggagcaacctggtacgaggctaaataa
DBGET
integrated database retrieval system
