Streptococcus mitis: smi_0264
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Entry
smi_0264 CDS
T01173
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
smb
Streptococcus mitis
Pathway
smb03030
DNA replication
smb03430
Mismatch repair
smb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
smi_0264 (polC)
03430 Mismatch repair
smi_0264 (polC)
03440 Homologous recombination
smi_0264 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smb03032
]
smi_0264 (polC)
03400 DNA repair and recombination proteins [BR:
smb03400
]
smi_0264 (polC)
Enzymes [BR:
smb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
smi_0264 (polC)
DNA replication proteins [BR:
smb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
smi_0264 (polC)
DNA repair and recombination proteins [BR:
smb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
smi_0264 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
HHH_3
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CBJ21536
UniProt:
D3H6P4
LinkDB
All DBs
Position
254126..258517
Genome browser
AA seq
1463 aa
AA seq
DB search
MSNSFEILMNQLGMPAEMRQDPALSQADIERVVVHKISKVWEFHFVFSNILPIEIFLELK
KGLSEEFSKTGNKAVFEIKTLSQEFSNPLLQSYYREAFSEGPCASQGFKSLYQNLRVRAE
DNQLFIEGSEAIDKEHFKKNHLPNLAKQLEKFGFPTFNCQVEKNDVLTQEQEEAFHAENE
QIVQAANEEALRAIEQLEQMAPPPAEEKPAFDFQAKKAAAKPKLDKAEITPMIEVTTEEN
RLVFEGVVFDVEQKVTRTGRVLINFKMTDYTSSFSMQKWVKNEEEAQKFDLIKKNSWLRV
RGNVEMNNFTRDLTMNVQDVQEVVHYERKDLMPEGERRVEFHAHTNMSTMDALPEVEEIV
ATAAKWGHKAVAITDHGNVQSFPHGYKAAKKAGIQLIYGMEANIVEDRVPIVYNEVEKDL
SEATYVVFDVETTGLSAIYNDLIQVAASKMYKGNIVAEFDEFINPGHPLSAFTTELTGIT
DDHVKNAKPLEQVLQEFQEFCKDTVLVAHNATFDVGFMNANYERHGLPKISQPVIDTLEF
ARNLYPEYKRHGLGPLTKRFGVALEHHHMANYDAEATGRLLFIFIKEVAEKHGVTDLARL
NVDLISPDSYKKARIKHATIYVKNQVGLKNIFKLVSLSNTKYFEGVPRIPRTVLDAHREG
LILGSACSEGEVFDAVLSQGVDAAVEVAKYYDFIEVMPPAIYAPLIAKEQVKDMEELQTI
IKSLIEVGDRLGKPVLATGNVHYIEPEEEIYREIIVRSLGQGAMINRTIGHGEHAQPAPL
PKAHFRTTNEMLDEFAFLGEELARKLVIENPNALAETFEPVEVVKGDLYTPFIDKAEETV
AELTYKKAFEIYGNPLPDIVDLRIEKELTSILGNGFAVIYLASQMLVQRSNERGYLVGSR
GSVGSSFVATMIGITEVNPLSPHYVCGQCQYSEFITDGSYGSGFDMPNKDCPKCGHKLSK
NGQDIPFETFLGFDGDKVPDIDLNFSGEDQPSAHLDVRDIFGEEYAFRAGTVGTVAAKTA
YGFVKGYERDYGKFYRDAEVERLAQGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYPA
DDVTAEWQTTHFNFHDIDENVLKLDVLGHDDPTMIRKLQDLSGIDPNEIPMDDEGVMALF
SGTDVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDVWLG
NAQDLIKQGIADLSTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGLWLKISEEERNGY
IEAMKANKVPEWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRAK
AFDIKTMGAGLDAIKRRMEEISEKRKNNEASNVEIDLYTTLEIVNEMWERGFKFGKLDLY
RSQATEFLIDGDTLIPPFVAMDGLGENVAKQLVRAREEGEFLSKTELRKRGGLSSTLVEK
MDEMGILGNMPEDNQLSLFDELF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatagttttgaaattttgatgaatcaactggggatgcctgctgaaatgagacag
gatcctgctttatcacaggctgatattgagcgagttgtggttcataaaattagtaaggta
tgggagtttcatttcgtattttctaatattttaccgattgaaatctttttagaattaaag
aagggcttgagcgaagaattttctaagacaggcaataaagctgttttcgaaatcaagact
ctatctcaagaattttcaaatccactcttgcagtcctattatagagaggctttctctgag
gggccatgtgctagtcaaggttttaagtctctttatcagaatttgcgtgttcgtgcggag
gacaatcagctatttattgaaggatctgaggcgattgataaggaacattttaagaagaat
catcttcctaatttagccaaacaacttgaaaagtttggttttccaacgtttaattgtcaa
gtagagaaaaatgatgtgctgacccaagagcaggaagaggcctttcatgctgaaaatgag
cagattgttcaagcggccaatgaggaagcgctccgtgctatagaacaactagaacagatg
gcacctcctccagcggaagagaaaccagcctttgattttcaagctaaaaaagctgcagct
aaacccaagctggacaaggcagaaattactcctatgatcgaagtgacgacggaggaaaat
cgtctggtctttgaaggggttgtgtttgatgtggagcaaaaagtgaccagaacagggcgt
gttttgatcaactttaaaatgacggactatacttccagtttttcgatgcaaaagtgggtt
aaaaatgaggaagaggctcagaagtttgatctaattaagaaaaattcttggctccgagtg
cgtgggaatgtggagatgaataacttcacacgcgatttgacgatgaacgtgcaagacgtg
caggaagttgttcactatgagcggaaggatttaatgccagaaggagaacgacgagttgag
tttcatgctcatactaatatgtcgaccatggatgcgctacccgaggtagaagagatcgtt
gcgacagctgctaagtggggacataaggcggttgccattacggaccatggaaatgtccag
tccttcccacacggctataaggcggccaagaaagcgggaatccagctgatttatggtatg
gaagccaatatcgtggaggaccgtgttcctatcgtttataacgaagtggagaaggacttg
tcagaagcaacctatgtggtctttgacgtggaaacgacgggtctatcagccatctataat
gacttgattcaggttgcggcttctaagatgtacaaggggaatatcgttgctgaatttgat
gaatttatcaatcccggacatcccttgtcagcttttactactgagttgactggaattaca
gatgatcatgtcaaaaatgccaaaccactggaacaagttttgcaagaattccaagaattt
tgtaaggatactgtcctagtcgcccacaatgcgacctttgacgttggctttatgaatgcc
aattatgagcgtcatggtctgccaaagattagtcagccagtgattgatacgctggagttt
gctcgaaacctctatcctgagtataaacgtcatggtttggggcctttgaccaagcgtttt
ggtgtggccttagaacatcaccacatggccaactacgatgcggaagctactggtcgtctg
cttttcatctttatcaaagaagtagcagaaaaacatggtgtgaccgatctagctagactt
aacgttgatttgattagtccagattcttataaaaaagctcggatcaagcatgcgaccatc
tatgtcaagaatcaggtaggtctaaaaaatatctttaagctggtttctttatccaatacc
aagtactttgaaggggtgccacggattccgagaacggttttagatgcccatcgggaaggt
ttgattttaggttcagcttgctctgaaggtgaagtttttgatgcagtcctttcccaaggt
gtggatgcggcggttgaggtggccaagtattatgactttattgaggtcatgccaccagct
atctatgctcccttgattgctaaggagcaggtcaaggatatggaagaactccagaccatt
atcaagagtttgatagaggtgggagaccgtcttggtaagcctgttctggctaccggaaat
gttcactatatcgaaccggaagaagagatttatcgtgaaattatcgtccgtagtttggga
cagggggctatgattaaccgaaccatcggtcatggggaacatgcacaaccagcacctctt
cccaaggctcattttagaacgactaatgagatgttggatgaatttgctttcttgggagag
gaactggcacgcaaactggttattgaaaatcccaatgccttggcagaaacctttgaacct
gttgaggttgttaagggggacttgtatacgcctttcatcgacaaggctgaagaaacggtt
gctgaactgacctacaagaaagcttttgagatttatggaaatccgctaccagatattgtt
gatttgcggattgaaaaagaattgacttccattctggggaatggatttgctgtgatttat
ctggcatcgcagatgctggttcaacgttccaatgaacggggttacttggttggttctcgt
gggtctgtaggatctagtttcgttgcgaccatgattgggattacggaggttaatcctctc
tctcctcactatgtctgtggtcagtgtcagtacagtgagtttatcacagatggttcgtac
ggttcaggatttgatatgcccaataaggactgtcctaaatgtggtcataaactcagcaaa
aatgggcaggatattccgttcgagaccttccttggatttgatggggataaggttcccgat
attgacttgaacttctcgggagaagaccagcctagcgctcacttggatgtgcgtgatatc
tttggtgaggaatatgccttccgcgcaggaacggttggtacggtggctgctaaaactgct
tatggatttgtcaaaggatacgagagggactatggcaagttctatcgtgatgcagaggtg
gagcgactagctcaaggtgcggctggtgtcaagcggacaacaggacaacacccgggagga
atcgttgttattccgaactacatggacgtctatgattttacgcctgtccaatatccagca
gatgacgtgacggctgaatggcagaccactcactttaacttccatgatatcgatgagaac
gtcctcaaactcgatgtactgggacatgatgatccaactatgattcgaaaacttcaggac
ttgtctgggattgaccctaatgaaatccctatggatgacgaaggcgtgatggccctcttt
tcagggactgatgtgctaggagtaactcctgaacaaatcggaacgcctacgggtatgttg
ggaattccagagtttgggaccaactttgtacgtgggatggtcgatgaaacccatccgacg
acttttgcagaattgcttcagctgtctggtttgtcccacggtaccgatgtgtggttggga
aatgcccaagatttgatcaagcaaggaatagcggatctatcgactgttatcggttgtcgg
gacgacatcatggtttatctcatgcatgctggtctcgaacctaagatggcctttactatc
atggaacgggtacgtaagggcttgtggctcaagatttctgaagaagagagaaatggctat
atcgaagccatgaaggccaataaggtgccagagtggtatatcgagtcctgtgggaaaatt
aagtacatgttccctaaagcccatgcggcagcctacgttatgatggccttgcgtgtggcc
tacttcaaggttcaccatcctatttattactactgtgcttacttctcaatccgtgctaaa
gcctttgatatcaagactatgggtgcaggcttggatgctatcaagcgcagaatggaagaa
atctctgaaaaacggaagaacaatgaagcctctaatgtggaaattgatctctatacaact
cttgagattgtcaatgagatgtgggaacgtggtttcaagtttggcaaactcgatctctac
cgcagtcaggcgacagagttcctcatcgatggggataccctcatcccgccatttgtagca
atggatggtctgggagagaacgttgccaagcaattggtgcgagcgcgtgaagagggagaa
ttcctctctaaaacagaactacgcaagcgtggtggactctcatcaaccttggttgaaaag
atggatgaaatggggattctgggtaatatgccagaggataaccagttgagtttgtttgat
gagttgttttaa
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integrated database retrieval system
