Streptococcus mitis: smi_0300
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Entry
smi_0300 CDS
T01173
Symbol
cbf1
Name
(GenBank) cmp-binding factor 1
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
smb
Streptococcus mitis
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smb03019
]
smi_0300 (cbf1)
Messenger RNA biogenesis [BR:
smb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
smi_0300 (cbf1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CBJ21572
UniProt:
D3H6T0
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All DBs
Position
295621..296562
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AA seq
313 aa
AA seq
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MKISHMKKDELFEGFYLIKSADLRQTRAGKNYLAFTFQDDSGEIEGKLWDAQPHNVEAFT
AGKVVHMKGRREVYNNTPQVNQITLRLPQHGEPNDPADFKVKSPVDVKEIRDYMSQMIFK
IENPVWQRIVRKLYTKYDKEFYSYPAAKTNHHAFETGLAYHTATMVRLADAISEVYPQLN
KSLLYAGIMLHDLAKVIELTGPDQTEYTVRGNLLGHIALIDSEITKTVMELGIDDTKEEV
VLLRHVILSHHGLLEYGSPVRPRIMEAEIIHMIDNLDASMMMMSTALALVDKGEMTNKIF
AMDNRSFYKPDLD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagattagtcacatgaaaaaagatgagctgtttgaaggcttttacctaatcaagtca
gctgacctgaggcaaactcgagctgggaaaaactacctagcctttaccttccaagatgat
agtggcgagattgaaggaaaactctgggatgctcaacctcataacgttgaggcctttacc
gcaggtaaggttgtccacatgaaaggacgccgagaagtttataataacacccctcaagtc
aatcaaattactctccgcctgcctcaacatggcgaacccaatgatccagctgatttcaag
gtcaagtcaccagttgatgtcaaggaaatccgtgactacatgtcgcaaatgatttttaaa
attgaaaatcctgtttggcaacggattgtccgaaagctctacaccaagtatgataaggaa
ttttactcctatccagctgccaagactaatcaccatgcctttgaaacgggtttggcttat
catacggcgaccatggtacgtttggcagatgctattagcgaagtctatcctcagctcaat
aagagcctgctctatgcggggattatgttgcatgacttggctaaagttatcgagttgacg
ggaccagaccagaccgagtacacagtgcgaggtaatcttcttgggcatatcgctctcatt
gatagtgaaattaccaagacagtgatggaactcggcatcgatgataccaaggaagaagtc
gttctgcttcgtcacgtcatccttagtcaccatggcttgcttgagtatggaagtccagtc
cgtccacgcattatggaagcagagattatccatatgattgacaatctggatgctagcatg
atgatgatgtcaacagctcttgctttggtggataaaggagagatgaccaataaaatcttc
gctatggacaatcgttccttctataaaccagatttagattaa
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