Streptococcus mitis: smi_0939
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Entry
smi_0939 CDS
T01173
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
smb
Streptococcus mitis
Pathway
smb03030
DNA replication
smb03430
Mismatch repair
smb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
smi_0939 (holB)
03430 Mismatch repair
smi_0939 (holB)
03440 Homologous recombination
smi_0939 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smb03032
]
smi_0939 (holB)
03400 DNA repair and recombination proteins [BR:
smb03400
]
smi_0939 (holB)
Enzymes [BR:
smb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
smi_0939 (holB)
DNA replication proteins [BR:
smb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
smi_0939 (holB)
DNA repair and recombination proteins [BR:
smb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
smi_0939 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBJ22186
UniProt:
D3H8J1
LinkDB
All DBs
Position
893427..894317
Genome browser
AA seq
296 aa
AA seq
DB search
MKQDQLKAWQPAQFDRFVRILEQDQLNHAYLFSGFFGSLEMAQFLAKSLFCTDKVGVLPC
EKCRNCKLIEQEEFPDVTLIKPVNQVIKTERIRELVGQFSQAGIESQQQVFIIDQAEKMH
PNAANSLLKVIEEPQSEVYIFFLTSDEEKMLPTIRSRTQIFHFKKQEEKLILLLEQMGLV
KKKATLLAQFSQSRAEAEKLAHQASFWTLVDESERLLTWLVAKKKESYLQVAKLANLADD
KEKQDQVLRIFEVLCGQDLLQARVRVILQDLLEARKMWQANVSFQNAMEYLVLKEI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagatcaactaaaggcttggcaaccagcccagtttgaccgctttgtccgtatc
ttggagcaagaccagctcaatcacgcctaccttttttcaggtttctttggaagcttggaa
atggctcaatttttggctaagagcctcttttgtacggataaggtaggtgtgttgccatgt
gagaaatgccgaaattgcaagctgattgaacaggaagagtttccagatgtcaccttgatt
aagccagttaatcaggtcattaagacagaacgcattcgggaattggtggggcagttttcc
caagcagggattgaaagtcagcaacaggtctttattatcgatcaggcggaaaaaatgcat
cctaacgcagctaattctctgctcaaggtcatcgaagaaccccagagtgaagtttacatt
ttcttcttgaccagtgatgaggagaagatgttacctacaatccgaagtcggacgcaaatt
tttcactttaaaaaacaagaagagaagctcatcttgctcttagaacaaatgggactggtt
aagaaaaaagcgactctcctagctcagtttagtcaatcgcgagctgaggcagaaaagttg
gcacatcaggcaagtttttggaccttggtcgatgaaagtgaacgcctgctgacttggtta
gtagctaagaaaaaagaaagttatctgcaggttgctaaattagccaacttagcagatgac
aaggaaaaacaagatcaggttttacggatttttgaagtcctctgtgggcaggacctcctg
caagcaagagtaagagtgattctacaagatttgctagaagctagaaaaatgtggcaagcc
aatgtcagctttcaaaatgccatggaatatctggtcttgaaagaaatataa
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