Streptococcus mitis: smi_1003
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Entry
smi_1003 CDS
T01173
Symbol
dnaE
Name
(GenBank) DNA-polymerase III alpha-chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
smb
Streptococcus mitis
Pathway
smb03030
DNA replication
smb03430
Mismatch repair
smb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
smi_1003 (dnaE)
03430 Mismatch repair
smi_1003 (dnaE)
03440 Homologous recombination
smi_1003 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smb03032
]
smi_1003 (dnaE)
03400 DNA repair and recombination proteins [BR:
smb03400
]
smi_1003 (dnaE)
Enzymes [BR:
smb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
smi_1003 (dnaE)
DNA replication proteins [BR:
smb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
smi_1003 (dnaE)
DNA repair and recombination proteins [BR:
smb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
smi_1003 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CBJ22250
UniProt:
D3H8Q5
LinkDB
All DBs
Position
973655..976783
Genome browser
AA seq
1042 aa
AA seq
DB search
MRTIEEKCKLIAQLDTKTVYSFMESVISIDKYVRVAKDYGYTHLAMMDIDNLYGAFDFLE
VTKKYGIHPLLGLEMNVLVDDKDVNLRFLALSSVGYQQLMKLSTAKMQGEKSWSVLSQYL
EDIAVIVPYFEELELLNLGCDYYIGVYPETLASEFHYPILPLYRVNTFESKDREVLQVLT
AIKENLPLREVPLRSRQDVFISASSLEKLFQERFPQALENLEKLISGIYYDLDTSLKLPR
FNPARPAVEELRERAELGLAQKGLTGKEYQDRLDQELAVIHDMGFDDYFLVVWDLLRFGR
SNGYYMGMGRGSAVGSLVSYALDITGIDPVEKNLIFERFLNRERYTMPDIDIDIPDIYRP
DFIRYVGNKYGSKHAAQIVTFSTFGAKQALRDVLKRFSVPEYELSAITKKISFRDNLKSA
YEGNLQFRQQINSKLEYQKAFEIACKIEGYPRQTSVHAAGVVISDQDLTDYIPLKHGDEI
PLTQYDAHGVEASGLLKMDFLGLRNLTFVQKMQELLAETEGIHLKIEEIDLEDNDTLALF
ASGNTKGIFQFEQPGAIRLLKRVQPVCFEDVVATTSLNRPGASDYINNFVARKHGQEEVT
VLDPALEDILAPTYGIMLYQEQVMQVAQRFAGFSLGKADILRRAMGKKDASAMHEMRASF
IQGSIEAGHTAEKAEQVFDVMEKFAGYGFNRSHAYAYSALAFQLAYFKTHYPAIFYQIML
NSANSDYLSDALEAGFEVAPLSINTIPYHDKIANKSIYLGLKSIKGLSKDLALWIIEHRP
YSNIEDFLAKLPENYLKLPLLEPLVKVGLFDSFEKNRQKVFNNLANLFEFVKVLGSLFGE
TIYSWLDSEDWTEQEKFYMEQELLGVGVSKHPLQAIASKAIYPITPISNLSENSYAIILI
EVQKIKVIRTKKGENMAFLQVDDSKKKLDVTLFSDLYRRVGQEVREGDFYYIKGKVQSRD
GRLQMIAQEIREAVAERFWIQVKNHDLDQEISRILDQYKGPIPVIIRYEEEQKTIVSPHH
FVTKSDELEAKLNGIVMKTIYR
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
gtgagaacgatagaggagaagtgtaaattgatcgcacaactagatacaaaaacagtctat
agttttatggagagtgtcatttcaatcgacaagtatgtgagagtagcaaaagactatggc
tacactcatttggctatgatggatattgacaatctttatggggcttttgactttctagag
gttacaaaaaaatacggcattcatcctttgttagggcttgaaatgaatgtccttgtagat
gacaaggatgtgaatctgcgctttttagctctatctagtgtgggctatcagcagttgatg
aaactttcaacagccaagatgcagggggagaaaagttggtcagttctatctcagtatcta
gaggatattgcggtaattgtgccttattttgaagaacttgagttgttaaatctaggctgt
gattactatataggggtttacccagaaacactggccagcgaatttcactatcctattttg
ccattgtatcgggtcaatacatttgaaagtaaggatagagaagttcttcaagtattaaca
gcgattaaagaaaatctaccgctcagagaagttcccttgcgttcgagacaagatgttttt
atatcagcaagttctttagagaaactattccaagaacgttttcctcaagccttggaaaac
ttagaaaagcttatttcaggtatttattatgacttggatactagtttaaaattacctcgt
tttaatccagcaaggccagccgtagaagaattgagagaacgtgctgaattggggcttgct
cagaaggggttaactggtaaagaatatcaagaccgtctagaccaagaattggctgttatt
catgatatgggctttgatgattatttcttggttgtttgggatttattgcgttttggacgt
tcgaatggctattatatgggaatgggacgaggttccgcagttggtagcttggtttcctat
gctttagacattacagggattgacccagtagagaaaaatctgatttttgaacgtttcctc
aatcgtgaacgctataccatgcctgatattgatattgatatcccagatatttatcgtcca
gattttatcagatatgttggtaataaatatggtagtaaacatgcggcacaaatcgttact
ttttctacttttggtgctaagcaagctctacgagatgtcttgaagcgctttagtgtaccc
gagtatgaattatctgcaattaccaagaaaatcagttttcgtgataatctcaagtcggcc
tatgagggtaacctccagtttcgtcagcaaatcaatagtaagctagaatatcaaaaagcc
tttgaaattgcttgtaagatagagggctatccaaggcaaacctctgtccatgcggctggt
gttgtgattagtgaccaagatttgacagactatatcccactaaagcatggtgatgaaatt
ccactgactcagtatgatgctcatggagttgaagcaagtggacttttgaagatggatttt
ctggggctacgaaatttaacctttgttcagaaaatgcaagagttgcttgctgaaacagaa
ggtattcaccttaaaattgaagaaatagatttagaagacaacgacaccctagctttattt
gcctctggaaatacaaaaggtatctttcaatttgaacaacctggtgccattcgcctactc
aagcgtgttcaaccagtctgttttgaagatgtcgtagcaactacttccctaaatcgacca
ggtgctagtgactatatcaataattttgtagctagaaaacatgggcaggaagaagtgact
gttctagatccagctctggaagatattttggctccaacttatggcattatgctctatcag
gagcaggttatgcaagttgctcagcgatttgctggatttagtcttgggaaggccgacatt
ttgcgccgagctatgggtaaaaaggatgcctctgccatgcatgagatgagggcttccttt
attcaaggctccatagaagctggtcatactgcggaaaaagcagagcaggtttttgatgtt
atggagaagtttgcaggttatggttttaacaggtcacacgcctatgcctactcagccttg
gccttccagttggcttattttaaaacacattatccagccatcttttatcagattatgttg
aattctgccaacagtgattatctatcagatgcattagaagcaggttttgaagtagcccca
ttgtccatcaatactattccctatcacgataaaattgccaacaagtctatctatctaggt
ttgaaatcgattaaggggcttagcaaggatttggcgctttggattattgaacatagacct
tattctaatattgaagattttttagctaaactacctgagaattatttgaaacttcccttg
ctggaacctttggtaaaagttggtcttttcgattcatttgaaaaaaatcgtcaaaaagta
ttcaataatttagctaatctatttgaatttgtgaaagtgttaggaagcttatttggagag
accatttatagttggctagattcggaggactggacggagcaagaaaaattctacatggaa
caagagcttctaggagtaggcgttagcaaacatcctctacaagctattgcaagtaaggct
atttatccgattactcctattagtaatttgtcagaaaatagttatgctattatcttgatt
gaagttcagaagataaaagtaattcgtaccaaaaagggtgaaaatatggccttcttacag
gtagatgacagtaagaaaaaattggatgttaccctcttttcagatttatatcgacgagtt
ggtcaggaagtaagagaaggagacttctactatattaaagggaaagtccagtcacgtgac
ggtcgtctgcaaatgattgcacaagaaataagagaagcagttgctgagcgcttttggatt
caggtgaagaatcatgatttggatcaagaaatttcacgtattttagaccagtataaaggc
ccaatcccagtcattatcaggtatgaagaggaacagaaaactattgtttctccccatcat
tttgtgactaaatctgatgaattagaagcgaaattgaatggaatcgttatgaaaacgatt
tatcgttaa
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