Streptococcus mitis: smi_1012
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Entry
smi_1012 CDS
T01173
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smb
Streptococcus mitis
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smb03016
]
smi_1012 (truB)
Enzymes [BR:
smb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
smi_1012 (truB)
Transfer RNA biogenesis [BR:
smb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
smi_1012 (truB)
Prokaryotic type
smi_1012 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CBJ22259
UniProt:
D3H8R4
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All DBs
Position
987895..988773
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AA seq
292 aa
AA seq
DB search
MNGIINLKKEAGMTSHDAVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVGKATRLVEFMQ
DEGKVYEGEITLGYSTTTEDASGEVVAETPVLSPLDEKLVDEAIASLTGPIIQIPPMYSA
VKVNGRKLYEYARAGQEVERPERQVTIYQFERTSPISYEGHLARFTFRVKCSKGTYIRTL
SVDLGEKLGYAAHMSHLTRTSAAGLQLEDALTLEEIAEKVEAVQLDFLHPLEIGTGDLVK
VFLTQEEATEVRFGRFIELDQTEQELAAFEDDKLLAILEKRDNLYKPRKVFN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtattatcaacttaaaaaaagaagcggggatgacctcgcatgatgcggttttt
aaactgcgtaagattttgggaaccaagaaaattggtcatggtgggaccttggatccggat
gtagttggtgttttaccgattgcggttggcaaggcgacacgcttggtcgagtttatgcag
gacgagggcaaggtctatgagggggaaattactctcggctattccacgacgactgaggat
gccagtggggaagtggtcgcagagacacctgttttatcgcccttggatgaaaagcttgtt
gatgaagcaatcgccagtctgacaggacctattattcaaattccgcctatgtattcggca
gtcaaggtcaatggtcgcaagctctatgagtatgcgcgtgctggacaggaagtggagcgt
ccagaacgtcaggtgaccatttatcaatttgaacgaacaagtccaatttcttatgagggt
catcttgcacgctttacttttcgtgtgaaatgcagtaaggggacttacatccgtaccttg
tcagttgacttaggagaaaaacttggttatgcggctcatatgtcacatctgactcgaact
agtgcagctggtttgcaactagaagatgctcttaccttggaagaaattgctgaaaaagtg
gaggctgttcaattggactttctccatcctctagagattgggacaggcgaccttgttaaa
gttttcctaactcaagaagaggctacagaagtacgctttggtcgttttatcgagctcgac
caaacagaacaagaattagctgcctttgaagatgacaaattgctagccattctagaaaaa
cgggataatctctataagccacgaaaggtttttaactag
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