Streptococcus mitis: smi_1587
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Entry
smi_1587 CDS
T01173
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
smb
Streptococcus mitis
Pathway
smb03410
Base excision repair
smb03430
Mismatch repair
smb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
smi_1587 (recJ)
03430 Mismatch repair
smi_1587 (recJ)
03440 Homologous recombination
smi_1587 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smb03400
]
smi_1587 (recJ)
DNA repair and recombination proteins [BR:
smb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
smi_1587 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
smi_1587 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
smi_1587 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
YjeF_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CBJ22827
UniProt:
D3HAC9
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All DBs
Position
complement(1630499..1632865)
Genome browser
AA seq
788 aa
AA seq
DB search
MILHQKICLVKSYLKNSLKFYKKAIWIEKKPKSCYNEAIEFLERVDVFLITPTYEWQFAP
QVEDADFTKIAKKAGLGSEVARLLFERGIQDQESLKKFLEPSLEDLHDPYLLHDMDKAVE
RIRQAIEEGENILVYGDYDADGMTSASIVKESLEQLGAECRVYLPNRFTDGYGPNASVYK
YFIEQEGISLIVTVDNGVAGHEAIELAQSMGVDVIVTDHHSMPETLPDAYAIVHPEHPDA
NYPFKYLAGCGVAFKLACALLEEVQVELLDLVAIGTIADMVSLTDENRILVQYGLEMLGH
TQRIGLQEMLDMAGIAANEVTEETVGFQIAPRLNALGRLDDPNPAIDLLTGFDDEEAHEI
ALMIHQKNEERKEIVQSIYEEAKTMVDPEKKVQVLAKEGWNPGVLGIVAGRLLEELGQTV
IVLNIEDGRAKGSARSVEAVDIFEALDPHRDLFIAFGGHAGAAGMTLEVEKLSDLSQVLE
DYVREKGADAAGKNKLNLDEELNLETLSLETVKSFERLAPFGMDNQKPVFYIKDFQVESA
RTMGAGNAHLKLKISKGEASFEVVAFGQGRWATEFAQTKNLELAVKLSVNQWNGQTALQL
MMVDARVEGVQLFNIRGKNAVLPEGVPVLDFAGEVPNIAASEAIVVKTIPEDITQLKTIF
QKQNFSAVYFKNDIDKAYYLTGYGTRDQFAKLYKTIYQFPEFDIRYKLKDLATYLNIQQI
LLVKMIQVFEELGFVTIKDGVMTVNKEAPKREIGESRIYQNLKQTVKDQEMMALGTVQEI
YDFLMEKE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgattttacaccaaaaaatttgtcttgtcaaatcatatcttaaaaattcactaaaattt
tataaaaaagcaatctggatagagaaaaagcctaaatcatgttataatgaagcaatagaa
ttcttagaaagagtggatgtctttttgataacacctacttatgaatggcagtttgccccg
caggttgaagatgcggattttacaaagatagccaagaaggctggactgggttctgaggtg
gctcggttattatttgagagagggattcaggaccaagaaagtctgaagaaatttttagaa
ccttctttggaggacttgcatgacccttatctgctccatgatatggacaaggcagtggaa
cggattcgtcaggccattgaagagggggaaaatattctcgtttatggagactacgatgcg
gatggcatgacttcggcgtcaattgttaaggaaagtttggaacaacttggtgccgagtgc
cgtgtttacttgcccaatcgttttactgatggctatggtccaaatgctagtgtttataaa
tactttatcgagcaagaaggaatttctttgattgtgacggtggacaatggggttgctggt
catgaggctattgaattggcccagtctatgggagtggatgtcattgtgacagaccaccat
tccatgcctgaaaccctccctgatgcctatgccattgtccatcctgaacatccggatgcg
aactatccttttaaatatttggctggttgcggagtggctttcaagctggcttgtgccctg
ttagaagaagtacaagtggaattgcttgatttggttgctattggtaccattgctgatatg
gttagtttgacagatgagaaccgtatcttggttcaatatggtctggaaatgttaggtcat
acccagcgtattggcctacaagaaatgctggacatggctgggattgccgccaacgaagta
acagaagaaacggttggtttccagattgcccctcgtttgaatgccttgggacgtctagat
gatcctaatcccgctattgatttgttgactggatttgacgacgaggaagctcacgagatt
gcccttatgattcatcagaaaaacgaagagcgcaaggaaatcgtccagtctatctatgaa
gaagctaagaccatggtggaccctgagaagaaggtccaagtcttggccaaggaaggctgg
aatcctggggttctaggaatcgtggctggtcgtttgttggaagaattgggacagacagtc
attgttcttaatatagaagacggtcgtgctaagggcagtgctcgtagtgtggaagcggtc
gatatttttgaggctctagatccccatcgagacctctttatcgcctttggtggccatgct
ggtgcggctggaatgacgctggaagtggagaaactctcagatttatctcaggtcttggaa
gattatgttcgtgaaaaaggtgcagatgctgctggcaagaacaagttaaatctagatgaa
gaactgaatttggagacacttagcttggaaacggtcaaaagttttgaacgtttagctccc
tttggaatggacaatcagaaacctgtcttttatataaaggattttcaggtcgaaagtgcc
cgtactatgggggcaggcaatgctcatctcaagttgaaaatttccaaaggtgaggcgagt
tttgaagtggtagcctttggccaaggcagatgggcgacagagtttgctcaaaccaagaat
ttagagctggcagtcaaattgtctgtcaaccaatggaatggccaaactgccctccagttg
atgatggtggatgcgcgtgtggagggtgttcaactctttaacatccgtgggaagaatgca
gtcttgccagaaggagttccagtcttggattttgctggagaagtgccaaatatagcggct
agtgaagctattgtcgtgaaaaccattcctgaagatattactcagctgaagaccattttt
cagaaacagaatttttccgctgtctatttcaaaaatgatattgataaggcctactatctg
acaggttatgggactagagatcagtttgcaaaattgtacaagactatctaccagtttcca
gagtttgatattcgctataaactgaaggatttggccacttatctcaatattcaacaaatc
ttacttgtcaagatgattcaagtctttgaagaactaggctttgtgaccatcaaagatggt
gttatgacagtcaataaggaagcgccaaagcgagagataggagaaagtcggatttaccaa
aatctcaaacaaaccgttaaagaccaagaaatgatggcgctgggtaccgtgcaagaaatt
tatgactttttaatggaaaaagaatag
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