Streptococcus mitis: smi_1598
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Entry
smi_1598 CDS
T01173
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smb
Streptococcus mitis
Pathway
smb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
smi_1598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smb03019
]
smi_1598
03016 Transfer RNA biogenesis [BR:
smb03016
]
smi_1598
Enzymes [BR:
smb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
smi_1598
Messenger RNA biogenesis [BR:
smb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
smi_1598
Transfer RNA biogenesis [BR:
smb03016
]
Prokaryotic type
tRNA degradation factors
smi_1598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
Hemerythrin
KH-I_KHDC4-BBP
SPATA25
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
CBJ22838
UniProt:
D3HAE0
LinkDB
All DBs
Position
complement(1641480..1643693)
Genome browser
AA seq
737 aa
AA seq
DB search
MTKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGQIIINPTQEQAEQSLLELTVAGT
KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDADL
QSEIIAAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYADHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQDAINRAKEIIAGLVREAKVDEVYHAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
RTNNVEDLVAIGDEVDVKVIKIDEKGRVDASMKALLPRPPKPERDEKGEKSERPHRPRHH
KDHKPKKEVTETPKDSE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaagtgtttcaaacgacttttgcgggtcgtgagttgatcgtagagactggt
caggttgctaagcaagcaaatggctctgttgtcgtgcgttacggtgagtcaactgtcttg
actgcggccgttatgtctaaaaaaatggcaactggggattttttccctctccaagtcaac
tacgaagaaaaaatgtatgcggctgggaagtttcctggtggctttatgaaacgtgaagga
cgtccttcaacagatgcgaccttgacagcgcgtttgattgatcgtccaatccgtcctatg
tttgcggaaggtttccgtaatgaagtccaagtcatcaacaccgtgctttcttatgatgaa
aatgcttctgcaccgatggcagctatgtttggttcatccttggcactttctatttcagat
atcccatttgatggcccaatcgctggtgtccaagtgggttatgtggatggtcaaatcatc
atcaaccctacgcaagagcaagcagagcaatctctccttgaattgacagtagcaggaact
aaacacgccatcaacatggtagagtctggtgccaaagaattgtcagaagaaatcatgctg
gaagcgctccttaaagggcacgaagcggtcaaagaattgattgctttccaagaagaaatc
gttgctgctgtcggtaaggaaaaagcagaagtagaattgcttcatgtggacgctgacttg
cagtctgaaatcatcgcagcctacaacagcgaccttcaaaaagcggttcaagtagaagaa
aaattggctcgtgaagctgcaactcaagcagttaaagaccaagtgactgctgtttacgaa
gaaaaatatgcggaccacgaagaatttgaccgcattatgcgtgatgtggctgaaatcttg
gaacaaatggagcacgctgaagtgcgccgtttgattacagaagataaggttcgtcctgat
ggtcgtaaggttgatgaaatccgtcctttggatgcggttgttgacttccttcctcgtgtg
cacggttcaggtctctttactcgtggacaaactcaggctctttcagttttgaccttggct
ccgatgggagaaactcaaatcatcgatggtttggatccagagtataagaaacgctttatg
caccactataacttccctcaatattctgtaggggaaactggtcgttacggtgcgccaggt
cgtcgtgaaatcggtcacggtgctcttggtgagcgtgctcttgctcaagtcttgccaagt
ttggaagaattcccatacgctatccgtctggtagcagaagtcttggaatcaaatggttct
tcatctcaagcttctatctgtgcgggaactcttgcccttatggctggtggtgtgccaatt
aaggcgccagtagctggtattgccatgggtctcatctcagatggaaataactacacagtc
ttgacagatatccaaggtttggaagatcactttggagatatggactttaaggttgctggt
actcgtgacgggattacagcccttcaaatggatatcaagattcaaggaatcactgcagaa
atcttgacagaagcccttgcccaagccaagaaagcccgttttgaaattcttgatgtgatt
gaagcaaccattccagaagttcgtccagaattggctccaactgctccaaaaattgatacc
atcaagattgatgtggacaagattaagattgtcatcggtaaaggtggagaaactatcgac
aagattatcgctgaaacaggcgttaagattgatatcgatgaagaaggaaatgtgtctatc
tactctagcgaccaagatgctattaaccgtgctaaagaaattattgctggtttggtccgt
gaagccaaagtggatgaagtttaccatgctaaggttgttcgtatcgagaaatttggtgcc
tttgtcaacctctttgacaagacggatgccctcgttcatatctcggagatggcttggacg
cgtaccaataatgtcgaagacttggtagccatcggggatgaagttgatgttaaggttatc
aagattgatgaaaaaggacgtgtggatgcttctatgaaagcccttcttcctcgtcctcca
aaacctgaacgtgatgaaaaaggcgaaaagtctgagagacctcaccgcccacgtcatcac
aaggaccacaaacctaagaaagaagttacagaaacaccaaaagattcagaataa
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