Sinorhizobium medicae: Smed_0027
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Entry
Smed_0027 CDS
T00555
Name
(GenBank) integral membrane sensor hybrid histidine kinase
Organism
smd
Sinorhizobium medicae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
HATPase_c_2
PAS
PAS_4
PAS_8
Motif
Other DBs
NCBI-ProteinID:
ABR58887
UniProt:
A6U5F7
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Position
22461..24680
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AA seq
739 aa
AA seq
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MRAGAETAREAGGTAAPAAPTVKIGAALLWQRRFWADPSAGAPVARLAYALAGIAAAMLL
LAVGASAGLHLLSAIIAAGGIAGAFLLLSGRDEASGSLRAGARETAQDAAAPLASIHDAM
GDLVIVRDPDGKVMQANVAFHELCGCADARGLTCAELGLRFEPKPDPYRYFVHICTSAGT
RLYDWHDVLVRDAHGRLMRHSIARDVTEDMLAASQREEARQRAEEASRAKSRLLATVSHE
IRTPLSGILGMSRLLAETRLSDEQKNYLVGMQQSGHTLVQLVEDLIDFSSLAAGRFQLRP
SQQDLRQTVENVVEMLSPRAHEKGIEIGATVAIEIPERMLFDAARLRQVLFNVVGNAVKF
TEKGGVIVSVDIENGSLRIRVDDSGPGMSADALARVFEEFEQAGDEAQRAKGTGLGLAIS
RRIMEAFGGSLTATSVSGKGSRFEIRFPMDVAGLSTVPVRRGILAGAHVLVMAPEGPSSA
ALAATIETLGATCHRASTLAVARRIVAGALANRLLLTDIIVDHRHAGQSRELLALEPAIA
GLGLRRTYLISPEERAGHPVSRLGGYEAWLIRPLREKSLIEVLLGRLRGMEKRDAINDNR
PVLREEPAAVKADVRAILLAEDDPVNALVLQSVLSRAGHAVDHVGDFMALEAAIRSAAPP
LIVTDLNMPGGDGLDMLRRLREAEAAGNRRRVPVLVLTADARADIYERLRVAGADAVLVK
PADPQRLLAEVTRLIHPAA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagggctggcgcggaaacggcacgggaggccggcgggaccgccgcgccagcagcgcct
acggtgaagatcggcgccgcgctcctttggcagcgccggttttgggctgatccttcggca
ggggcgccggtcgcgcggctcgcctatgctctcgccggcatcgctgcggcaatgctgctc
ctcgcggtcggtgcgagcgcgggtctgcacctgttgtctgcgatcattgcggccgggggc
atcgccggtgccttcctgctgctgtccggtcgagacgaagcgtccgggagccttagggcc
ggcgcccgcgaaactgcgcaggacgccgcggcgccccttgcatccatccatgacgccatg
ggcgatctcgtcatcgtccgcgaccccgacggcaaggtcatgcaggccaatgtcgccttc
catgagctttgcggatgcgccgacgcgcggggcctgacctgcgcggagctgggattgcgc
ttcgagccgaagccggacccctaccgctacttcgtgcatatttgtacgtccgcaggcacg
cgcctctacgattggcacgacgtgcttgtccgcgacgcgcatggccggctgatgcgccat
agcattgctcgagacgtcacggaggatatgctggcggcaagccagagagaggaggcgagg
cagcgcgccgaggaggcgagccgggccaagtcccgtctgctcgccaccgtcagtcatgag
atccgtacgccgctttccggcatcctcggtatgagccggctcctcgcagagacgcggctg
tcggacgagcagaagaactatctcgtcggcatgcagcagtccggacacaccctggtccaa
ctcgtcgaggacctgatcgatttttcctcgcttgccgccggacggttccagctgcgcccg
tcgcagcaggacctgcgtcagacggtcgagaacgtggtcgagatgctgtctccccgcgcg
catgagaagggtatcgagataggtgcaacggtcgccatcgagatacccgagcggatgctg
ttcgatgcggcgcgcctgcgccaggtgctgttcaacgtggtcggcaacgcggtgaaattc
accgagaagggcggcgttatcgtctctgtcgatatcgagaatggctcgttgcgcatccgg
gttgacgatagcggacccggcatgtccgccgacgcgctcgcacgcgtcttcgaggagttc
gagcaggccggtgacgaggcccaacgtgcgaagggaacggggctcggcctcgcaatatcc
cggcggatcatggaagctttcggcggcagccttaccgccacgagcgtttccggcaaggga
agccgtttcgagatccggttcccgatggatgtcgccggtctctcgacagttccggttcgc
cgcggcattctggcgggtgcgcatgtgcttgtcatggcgcccgaagggccttcctcagcc
gcgcttgccgccacgatcgagacgctgggcgccacgtgccatagggcttcgacgcttgcc
gtcgcgcggcggatcgtcgccggcgcgctcgccaatcggctgctgctgacggatatcatt
gtcgatcaccgccacgctggacagtctcgcgagctccttgctctcgagccggcgatcgcc
ggcctgggtttgcgcagaacctatctcatcagccccgaggagcgggcgggccatcccgtg
agccgactcgggggctatgaggcctggctgatccgccctcttcgcgagaaatcgctgatt
gaggtgctacttgggcgactcaggggaatggaaaagcgcgatgcgatcaacgacaacaga
ccggtgctgcgggaggagccagcggccgtgaaggcggatgttcgcgccatcctgcttgca
gaggacgaccctgtgaacgcgctcgtcttgcagtcggttctcagccgggccggccatgcc
gtcgatcacgtcggcgacttcatggcgctcgaggccgcaatccgctcggccgcgccgccc
ctgatcgtcacagacctcaacatgccagggggcgatggtctcgacatgctccgacgtctt
cgcgaagcggaggccgctggcaacaggcggcgtgtgccggttctcgtcctgaccgcggac
gcgcgcgccgatatctatgagcgccttcgagttgcgggagcggacgccgtgctggtgaag
cctgccgatccgcagcggcttcttgccgaagtcacccgcctcatccaccccgcagcatag
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