Sinorhizobium medicae: Smed_0063
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Entry
Smed_0063 CDS
T00555
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K18901
membrane fusion protein, multidrug efflux system
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_0063
01504 Antimicrobial resistance genes [BR:
smd01504
]
Smed_0063
Transporters [BR:
smd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Smed_0063
Antimicrobial resistance genes [BR:
smd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
Smed_0063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
VWA_3_C
OEP
CusB_dom_1
SpuA_C
TRP_2
Motif
Other DBs
NCBI-ProteinID:
ABR58923
UniProt:
A6U5J3
LinkDB
All DBs
Position
complement(71262..72470)
Genome browser
AA seq
402 aa
AA seq
DB search
MTSTVTRRVLWGAGLSILLSVGGGAAVFFGLPQRFHADAAVEAPAAAAPAVPVSVAKAES
RRITTWESFSGRLEAIERVEVRPRVGGAILSAHFREGALVEKGDLLVTIDPEPFAAAVER
AEAQVAAAEARVALAKTELERGRKLVTTSAIPQSGVDQRLSVYDEAQANLRSAKAALRTS
KLDLAYTEVRAPIRGRVGGLNVTAGNLVSAGSASPVLTTLVSVDPIYASFNVSEEVVATA
LAELSASAGSIEAIERIPVEIGTAADEGTPITGHIQLINNEVDAATGTIRLRAELANADG
RLIPGQFVRIRIGDPQPEEKLVISDRAISSDQDKKFVLVVGADNKVEYRQVTLGPVADGL
RIVENGLKPGESIVVNGLQRVRPGVVVAPQPVEQATASIAKP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgacagtaacccgccgggtcctgtggggcgccggtttgagcattcttttgtcc
gtcggcggcggcgcagccgtcttcttcggactgcctcagcgctttcatgcggacgccgcg
gtcgaggcgcccgctgccgcggctccagccgttccggtctccgtcgccaaggccgagtcg
agacggatcacgacctgggagagcttctccggccgtcttgaagcgatcgagcgcgtcgag
gtccgtccccgcgtcggcggcgcgatcctgagcgctcacttccgcgaaggggccctggtc
gaaaagggagatctgctggtcaccatcgaccccgagcccttcgccgctgcagtcgagcgg
gccgaggcgcaggttgccgccgccgaagcgcgtgtcgcgctcgctaaaaccgagctcgaa
cgcggccgcaagctggtgaccacgagcgcgatcccgcagagcggcgtcgaccagaggctt
agcgtttacgacgaggcccaggccaacctccgctctgcgaaggctgccctgcggacctcc
aaactcgacctagcctacaccgaagtgcgcgcgccgatcagaggccgtgtcggaggactc
aatgtgacggccggcaatctcgtctctgccggctccgcctcgccggtcctgacgacgctc
gtctcggtcgaccccatctatgcgagcttcaacgtcagcgaggaagtcgtcgcgaccgcg
ctggcagaactttccgcctcggccggcagcatcgaagcgatcgagcgcatcccggtcgag
atcggcacggccgccgacgaggggacgccgattacaggccacattcagctcatcaacaac
gaggtggacgcggcaaccggcacaattcggctgcgggcggaactcgccaatgccgacggc
cgcctgatcccgggtcaattcgtgcgtatccggatcggagatccgcagccggaggaaaag
ctggtgatcagcgaccgcgccatcagttcggatcaggacaagaaattcgtcctggtcgtc
ggggctgacaacaaggtggagtatcgccaggtcaccctcggacccgtcgccgacggtctt
cggatcgtggagaacgggctgaagcccggcgagagcatcgtcgtcaacggcctgcagcgc
gtacgccccggtgtagtcgtcgccccgcagccggtcgaacaggcaaccgcctcgatcgcc
aaaccatag
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