Sinorhizobium medicae: Smed_0086
Help
Entry
Smed_0086 CDS
T00555
Name
(GenBank) YadA domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_0086
Transporters [BR:
smd02000
]
Other transporters
Pores ion channels [TC:
1
]
Smed_0086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
Motif
Other DBs
NCBI-ProteinID:
ABR58946
UniProt:
A6U5L6
LinkDB
All DBs
Position
95969..97768
Genome browser
AA seq
599 aa
AA seq
DB search
MVVATCTRSVDRRRDRGVSSSWFRLALGRRRLIGPGTAVLLAAAVVTGSAPAVSAATLTS
IFATEANRTGENGATANSACDSELRFCSTAIGTGADASGVASTALASEAVASGTKAIAIG
GRSSASGENSIALGTSAQAAGSQATAVGLQSNAGGGNSIALGFGAQTRAGDATDPDGATS
AVAIGSGAQANGEQSLSFGSLAEATGEGSVAIGPLSKVSAKNGVGIGNDNKVSGIDSVGI
GTGNSVTGEKSVGIGYANTVSGDNSGAIGDPTTITGTGSYSLGNDNTIDADNAGTFGNDN
KLANTADGSRIVGNGNDIDVGDAFVLGNTADVTVEGGVALGTSSVSDTGAVDGYVPFGAS
EADRNAIAETKSTSGAVAVGNDAPGAEIYRQITGLAAGTADSDAVNVSQLKALEGGVKNA
VSYDTDAAGQKLNTITLKGGDPNQPVLVANVAKGVKDTDAANVGQVKEGIAETKHYTDEK
TNWAIDQSASYTDTVTDTKVRAANHYTDQKFSQLSGELGEVRGEARQAAAIGLAASSLRF
DDRPGKLSVALGGGFWRSEAALAFGAGYTSENGRMRANLTGTAAGGHVGVGAGLSITLN
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
ttggtagtagcgacttgcacacgttctgttgatcgcaggcgagatcgaggtgtctcttca
agctggtttcggcttgcgctggggagacgacggctgattgggccgggtacggccgtcttg
ctggcagctgccgtggtgacaggttccgcgccggcagtctcggccgccacgctgacctcg
atcttcgcgaccgaggccaacagaaccggcgaaaacggcgcgaccgccaactctgcatgt
gattcggagctgagattttgctccactgcgatcggcactggtgccgacgcaagcggtgtc
gcttcaaccgcgcttgcttccgaggccgtggcatccggaacgaaagcaattgcgatcggc
ggacgctcgtcagcgtccggggagaacagcattgctctaggcacgtctgcgcaagccgcg
ggaagtcaggccaccgccgtcggtctgcaatcgaatgccggtggcggcaattcgatcgcc
ttgggctttggggcgcagacgagggccggggatgcaacggatccggacggcgcgacctca
gccgtagcgatcggatccggcgcgcaggccaatggcgaacaatccctgagcttcggctca
ttagccgaggcgaccggtgaaggaagcgtcgccatcggtccgctcagcaaagtgtcggcc
aaaaatggcgtcggcatcggtaacgataacaaggtttcaggcatcgacagtgtcggtatc
ggtaccggcaattcggtgacaggtgaaaaaagcgtcggcatcggatacgccaataccgtc
tcgggcgataacagtggtgcaataggcgacccgaccaccattacgggcaccggttcctat
tctctcggcaacgacaacaccatcgacgccgacaacgccggcacgttcggcaacgacaac
aaactggcgaatacggccgatggcagccgcatcgtaggcaacggcaacgacatagatgtc
ggggacgctttcgtgctcggcaatacggccgacgtcacggtcgagggcggcgtcgcgctc
ggtaccagctctgtttccgacaccggcgcggtggacggctacgtgccgtttggtgcatcg
gaagcggacagaaacgcaatcgccgaaacgaaaagcacgagcggcgccgtggcagtgggc
aatgatgcccccggtgccgaaatctatcgccagatcacggggcttgccgccggtacggcg
gattccgatgccgtcaatgtctcacagctcaaggccctcgaaggcggcgtgaaaaatgcc
gtatcctatgacaccgacgccgccggccagaagctcaacacgatcaccttgaagggtggc
gaccccaaccagccggttctcgtggccaatgtcgccaaaggcgtaaaggacaccgatgcc
gccaatgtcggtcaggtcaaggaagggatcgccgaaaccaagcactacacggacgaaaag
accaattgggcgatagatcagtcggccagctatacggataccgtcacggacaccaaggtc
cgcgcggcgaaccactacacggatcagaaattctcgcagctgtcgggcgagctcggggaa
gttcgcggggaagcccgccaggccgccgcaatcggcctcgcggcatcctccctgcgtttc
gacgaccggcctggcaagctaagcgtagcgcttggaggcgggttctggaggagcgaagca
gcactcgcattcggcgccggctacacgagtgagaacggccgcatgcgggcaaatctcacc
ggaacggcggccggggggcacgtcggcgttggcgcggggctcagcatcactttgaactga
DBGET
integrated database retrieval system
