Sinorhizobium medicae: Smed_0117
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Entry
Smed_0117 CDS
T00555
Name
(GenBank) protein of unknown function DUF344
KO
K22468
polyphosphate kinase [EC:
2.7.4.34
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00190
Oxidative phosphorylation
smd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Smed_0117
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Smed_0117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smd03019
]
Smed_0117
Enzymes [BR:
smd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.34 GDP-polyphosphate phosphotransferase
Smed_0117
Messenger RNA biogenesis [BR:
smd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Smed_0117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPK2
Motif
Other DBs
NCBI-ProteinID:
ABR58977
UniProt:
A6U5P7
LinkDB
All DBs
Position
complement(130254..131156)
Genome browser
AA seq
300 aa
AA seq
DB search
MAIDEATAAAKPGSRAVELQIHGKSRIFDIDDPDLPKWIDDEAFGSDDYPYKKKLDSDEY
QETLTRLQIELVKVQFWMQATGKRVMAVFEGRDAAGKGGAIHATMAYMNPRSARVVALTK
PTETERGQWYFQRYVATFPTAGEFVLFDRSWYNRAGVEPVMGFCTPNQYEQFLRETPRFE
ELIAHEGIHLFKFWINIGREMQLKRFHDRRHDPLKIWKLSPMDIAALNKWDDYTAKRDRM
LKETHTEHGPWTVIRGNDKRRARLNVIRHMLSQLDYDGKDETAIGAVDEKILGTGPGFLS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgacgaagcgacggccgcagcgaagccgggaagccgggcggtcgaactgcaa
atccatgggaaaagccgtatcttcgacatcgatgatccggacttgccgaagtggatcgac
gacgaggcgttcggctcggacgattatccctacaagaagaaactcgattccgatgaatat
caggaaacgctaacgcgactgcagattgagctcgtcaaggtccagttctggatgcaggcg
accggcaagcgcgtgatggcggtgttcgagggacgcgacgccgccggcaagggcggcgcg
atccatgcgacgatggcctatatgaacccgcgctcggcgcgcgtcgtcgcactgacgaag
cccacggagaccgaacgtggccagtggtatttccagcgctatgtcgcaaccttcccgacc
gccggcgaattcgtcctcttcgaccgctcctggtacaaccgcgccggcgtcgaaccggtc
atgggcttctgcacgccgaaccagtacgagcaattcctcagggagacgccccgcttcgag
gagttgatcgcgcacgaaggcatccacctcttcaagttctggatcaatatcggccgggaa
atgcagctgaagcgcttccatgaccggcgccacgatcccttgaagatctggaagctctcg
ccgatggacatcgcagccctcaacaagtgggacgattataccgcaaagcgagaccgcatg
ctgaaggagacgcacacggagcacgggccatggacggtcatccgtggcaatgacaagcgc
cgtgcgcggctcaacgtgatccgccacatgctttcgcagctggactatgacggcaaagac
gagacggcgatcggcgctgtcgacgagaagatcctaggcacggggcccggttttctcagc
taa
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