Sinorhizobium medicae: Smed_0144
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Entry
Smed_0144 CDS
T00555
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00071
Fatty acid degradation
smd00280
Valine, leucine and isoleucine degradation
smd00310
Lysine degradation
smd00362
Benzoate degradation
smd00380
Tryptophan metabolism
smd00410
beta-Alanine metabolism
smd00640
Propanoate metabolism
smd00650
Butanoate metabolism
smd00907
Pinene, camphor and geraniol degradation
smd00930
Caprolactam degradation
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
smd01120
Microbial metabolism in diverse environments
smd01200
Carbon metabolism
smd01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Smed_0144
00650 Butanoate metabolism
Smed_0144
09103 Lipid metabolism
00071 Fatty acid degradation
Smed_0144
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Smed_0144
00310 Lysine degradation
Smed_0144
00380 Tryptophan metabolism
Smed_0144
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Smed_0144
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Smed_0144
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Smed_0144
00930 Caprolactam degradation
Smed_0144
Enzymes [BR:
smd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Smed_0144
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Smed_0144
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Smed_0144
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
UDPG_MGDP_dh_N
FAD_binding_3
NAD_binding_8
Pyr_redox
2-Hacid_dh_C
ApbA
GIDA
Motif
Other DBs
NCBI-ProteinID:
ABR59003
UniProt:
A6U5S3
LinkDB
All DBs
Position
complement(156309..158519)
Genome browser
AA seq
736 aa
AA seq
DB search
MSYTNFKIETDADGIALVTWDMPDKSMNVITEEVMTELDGIIDQTAADPAVKGVVITSGK
SSFSGGADLSMIKSMFSFQAEEKKKDPDDAARKLFDLVGRMTGLFRKLETSGKPWVSAIN
GTCMGGAFEMSLACHGRVASNAKSVKIALPEVKVGIFPGAGGTQRVPRLTNTQDALQMMT
TGSSLTPARAKAMGLVHEVADPDKLIEAAKAMIRNGLKPVQPWDEKGFKLPGGGIWTPAS
AQLWPAASGILRRETYGNYPGAIAILKCVYEGLQVPFDTALKIEQRYFTEILQTTEAFSM
IRSLFVSMQELGKGARRPAGVPKTELRHVGVVGAGFMGASIAYVTAAGGIPVTLIDRDME
AAAKGKAHSEGLVKDAVGKGRLTKEEGEALLSRITPSADYADLKDAGLVIEAVFEDRQVK
KDVIDKVEAVIADNAIFASNTSTLPITGLARNSKRPEQFIGIHFFSPVEKMMLTEVILGE
ETGDHALASALDFVAAIRKTPIVVNDTRGFYVNRCVFRYIHEAYDMLIEGVPPAMIENAA
KMAGMPVGPLSLNDEVAIDLSQKILRAAVADLGEKAVDPAHMALIDKMVDELDRRGRKNG
KGFYEYPAKPAKKYLWPGLKELFPQTNADGIDVDVLKQRFLVTIALEAARTIEEGIVTDP
READVGSILGFGFAPYTGGTLSYIDGMGAKAFVTLCETLARDYGDHFRPTALLKEMAEKE
ETFYGRFDPYAAPKAA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacacgaacttcaagatcgaaacagatgccgacggcattgcactggtcacctgg
gacatgcccgacaagtcgatgaacgtcatcaccgaagaggtgatgacggaactggacggg
atcatcgaccagacggccgccgaccctgccgtcaagggcgtggtcatcacctccggcaaa
tcctccttctccggcggcgccgacctttcgatgatcaaatccatgttcagcttccaggcc
gaggaaaagaaaaaggatccggacgatgccgcccggaaactcttcgacctcgtcggccgg
atgaccgggctattccgcaagctcgaaacctcgggcaagccctgggtctcggcgatcaac
ggcacctgcatgggcggcgcattcgagatgtcgctggcctgccacggccgcgtcgcttcc
aatgcgaaatcggtgaagatcgcgcttcccgaggtcaaggtcggcatcttcccgggagcc
ggcggcacccagcgcgttccacggctgacgaatacgcaggacgcgctgcagatgatgacg
acgggctcctcgctcacgccggcgcgcgcgaaagccatggggctcgtgcacgaggtggcc
gacccggacaagctgatagaggctgccaaggcgatgatcagaaacggcctgaagccggtg
cagccctgggacgaaaagggcttcaagctgccgggcggcggcatctggacacccgcctcc
gcacaactctggccggccgcctccggcatcctgcgccgcgagacctatggcaattatccc
ggcgcgatcgccatcctgaaatgcgtctatgagggactgcaggtccccttcgatacggca
ttgaagatcgagcagcgctacttcaccgagatcctgcagacgaccgaggccttctcgatg
atccggtcgctgttcgtctcgatgcaggaactcggcaagggcgcacgccggccggccggc
gtgccgaaaaccgagctccgacatgtcggcgtcgtcggcgccggcttcatgggcgcctcg
atcgcttatgtgaccgccgctggcggcatcccggtcaccctcatcgaccgtgacatggaa
gcggcagcgaagggcaaggcgcattcggaaggcctggtgaaggatgcggtcggcaagggc
cgcctgacgaaggaagaaggcgaagcactgctttcacgcatcacaccttcggccgactat
gccgatctcaaggatgcgggcctcgtcattgaagccgtcttcgaggaccggcaggtcaag
aaggacgtgatcgataaggtggaagcggtgatcgccgacaatgcgatctttgcctccaac
acctcgacgctgccgatcaccggcctcgcccggaattcgaaacgtccggagcagttcatc
ggcatccatttcttctcacccgtcgaaaagatgatgctgacggaagtcatcctcggcgag
gagaccggcgatcacgcgcttgcctccgcgctcgacttcgtcgcggcgatcaggaagacg
ccgatcgtcgtcaacgacacgcgcggcttctacgtcaaccgctgcgtcttccgctatatc
cacgaagcttacgacatgctgatcgagggcgtaccgccagcaatgatcgagaatgccgcc
aagatggccggcatgccggtcgggccgctgtcgctcaacgacgaggtggcgatcgatctg
agccagaagatcctgagagcggcggtggccgatctcggcgaaaaggcggtcgatcccgcg
catatggcactgatcgacaagatggtcgacgagctcgaccggcgcggccgcaagaacggc
aagggcttctacgagtatcctgcaaagccggccaagaaatatctctggccgggactgaag
gagctcttcccgcagacgaatgccgacgggatcgacgtcgacgtgctgaagcagcgcttc
ctggtgacgatcgcgctcgaggcggcgcgcacgatcgaggaaggcatcgtcactgatccg
cgcgaagccgatgtgggctccatactcggtttcggatttgcgccctacactggcggcacg
ctctcctatatcgatggcatgggcgcaaaagctttcgttacgctctgcgagacgctcgcc
agggactatggcgaccacttccggccgacggcgctcctgaaggagatggcggagaaggag
gaaaccttctacggccggttcgatccatatgcggcgccgaaggccgcgtaa
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