Sinorhizobium medicae: Smed_0197
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Entry
Smed_0197 CDS
T00555
Name
(GenBank) Beta-ketoacyl synthase
Organism
smd
Sinorhizobium medicae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
KR
Ketoacyl-synt_C
ADH_zinc_N_2
ADH_zinc_N
PS-DH
KAsynt_C_assoc
PKS_DH_N
adh_short
ADH_N
PP-binding
Thiolase_N
CurL-like_PKS_C
ACP_SdgA_C
Epimerase
Motif
Other DBs
NCBI-ProteinID:
ABR59056
UniProt:
A6U5X6
LinkDB
All DBs
Position
complement(217291..224793)
Genome browser
AA seq
2500 aa
AA seq
DB search
MTVEIIGRACLAPGAKSPQALFKILRQGKCTVTRVPADRWDMARFWHPVMGTPGKTYSFA
AGVLDQIYDFDPAVFGMSQREAMYMDPQQRVLLQLAWRALEDANISVASLHGENVGVYVG
ASSLDHANLTVDDPAAAGPYFMTGNTLSIVSNRISHVFGLSGPSMTVDTACSSSLVALDQ
AMRALNAGEIDTAIVGGINVLAHPLPFVGFAQARMLSPEGLCRAYDNDGAGYVRAEGGVV
FVLRRTDRAQRERDRSYARIVASGVNSAGRTNGISLPSREAQANLLKMIYEGNGIDANQV
AFVEGHGTGTKVGDPAEVWSIGTVIGAKRRAPVPIGSIKSNIGHTEPASGLFGMMKAVLA
LENNYLPASLHFETPNEQIDFDGLNVRVTANPIELLKGKRARLAGINSFGFGGANAHVVI
SDPDPAQGEKATTSPAGHVFLASAHTVSSLENLLRDYKAAFAHANKEEMRAIVAASGANR
THLRHRFAVRSDHPEDIVRAIANHLEKPGSDIGETGEAAAKDAKVAFVFSGNGSQWAGMG
IEAFRENLHFRQSFTSVSALFRFHSDVVLTDLLTDPELDGKLADTKVAQPLLFAIQAALS
DSLVAMGIKPTAVFGHSVGEIAAAYAAGALSLVDAVSIVAKRSLHQDLLAGQGTMAAVMF
GAEAAKAFAAERGLEDICVAAINAHNSVTISGPADEISAYRDAARKAKIPVQILDINYPF
HHPIIDRAKEAFLSDIPDIAPRRTELTYLSTVTGAALDGTELDPDYWWKNVREPVRFQAA
AEAALELGCRLFIEISPRPILGSYVKETIKQAAVPALVVPTLLRDAGGSGHDPISASMAR
AVAHGAAVDRSRVYGKRNAFVELPALPFEPVELRPATTTDATDLFGRSAKPYRLNGWRGD
PNAGSWKNHVDAHLFPDLAEHVVDGKAILPGSGFIEIAVSAAQQYHGSDEVEITNLEIVR
PLELSDSRIMELSTILSPETGDIEIRSRERLSEDDWTVHAVARSRKPLPATRNECPSTKG
LARTASVSAAKAYGTAKQFGLDYGPRFQLLSKAVAYGDRLIEVELKQPQASGHPHLTYAL
HPISVDATFHGLVALFDRFTGDRGGAPYIPVRFGSVRVVNAGRRIARAMIEIERVSANSI
KAKFHFFDETGAAIAHFEDCRFRRTYLRKHKTLEGLSFHYEAVLSDVLVPGMKRAAAMPA
KLVEPIDNDGLDNATLLFNAAIYRACQEIALKLGKGTATVRSDALPGDLDFQCFLTSCLL
TLEDAGLCEHQNGTWKVAPEFMLPTVPEILGELYGDRPDRAVEAVLVNNAYTEALSRLDA
LLAPAPAGDASASFNAAFMSEATLDHQAVHSAASRSRMDHVLHTLAGALAAQPAGSRLRL
IELGSVSAGFSRRLADLAARHGAALSIFEPRDNAQRNLEIAFEEDAHVRVLKKSEFADIG
SFDLAVSASDNLYHLIEEGSGVRSALRSMLPGSGLIAAVSAPSIFADFALGLSGGWFERS
QAAEFPIGKIAAVPHWQKCLEDLDLGDVVVTDRECPHGSTILIEARGTAAASVGEVPGGG
AAPYLLIEPATQKILAAGKGANHVRVTGDIAADLATLRDALAALGDRPVRAIFMSEADRA
ADEDSALLQSRVLALSAFAEALKQHLAGAEPDGDDRPRLVLVAPGGAPVKASASCGLNSG
LWAFARVLQNEYEFIDIHTLDLAGDADIGRKDILSLAIPLLTVSGLNREWLFDRKTGLLS
ELRAVPGATNKADGKTTAFTAATIRQRVSSQIASIAWEETNIPEPGRGEVLVAVAATGLN
FRDVMWAMGLLPEEALEDGFAGATIGMELSGHVVAVGEEVDDLAVGDAVMAIASSAFSTH
AIVARAGIAKLPRAMNPVAAATLPVAFLTAYYAIVELGRIQAGETILIHGAAGGVGLAAL
QVAKLKGAKVIATAGTREKRRFLTMLGADYVFDSRSLGFVNDVRSVTGGEGVDLVLNSLF
AEAMEQSLSLVKPFGRFLELGKRDYYADSKIGLRPFRRNVSYFGIDADQLLVKAPDLTKR
IFMEIGALFEEGKLTPLPYRAFDYDEIGNAFRLMQNAGHIGKIVVLPPVAGRHEVMKKPE
RDMKVDPHGIHLVVGGIGGFGLVTANWLVERGARRIALCSRRGLPDAETRAMIERWQNDG
VVASVHACDITDPAAVETLLDALRSEAPLRSVIHAAMVLDDALISNLNRERNRPVIDTKA
KGAAILDRLTRGDRLDNFILFSSATTLVGNPGQANYVAANGYLEGLARARRQEGLAGLAV
GFGAIADAGYLTQNAEVNDLLAKRIGKTALKAQLALDMVESHIAADPGTVDAAVVMISEI
DWTAARNLPVARNALFEVILRSADQHAAGAEGTKMDLVAMIEGKSPQEAEDILFDLVAGE
IAAILRVSKDTVTRGKILKEIGLDSLMAVELGMSFQQNTGFDMPLSGVADNTTVGDIARK
LHEKVSKRDQSNEGEAGDDKIVTALTQRHVGAAKEKALTQ
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgaaatcatagggcgtgcatgccttgcacccggagcgaaatctccgcaggcg
ctgttcaaaattcttcgtcagggcaaatgcaccgtgacacgcgtccctgcggaccgctgg
gatatggcgcgattctggcacccggtcatgggcaccccaggcaagacctattcctttgcc
gcgggcgttctcgaccagatctatgatttcgaccccgccgtattcgggatgtcgcagcgc
gaggccatgtatatggacccgcagcagcgggttctgttgcagctcgcctggcgcgcgctc
gaggacgccaatatctccgtcgcctcgctgcacggtgaaaatgtcggcgtctatgtcggc
gcctccagcctcgaccacgccaacctgacggtcgacgatccggcagccgccggaccttat
ttcatgacggggaacaccctgtcgatcgtctccaaccgtatttcccacgtcttcggcctg
agcggtccgagcatgaccgtcgacacggcctgttcctcttcgctcgtggcgcttgatcag
gcgatgcgggcgctgaacgcgggcgagatcgacacggcgatcgtcggcggtatcaatgtc
cttgcccacccgctacccttcgtcggcttcgctcaggcgcgcatgctctcgcccgaagga
ctctgccgcgcctatgacaacgacggcgccggctatgtgcgcgccgaaggcggcgtcgtt
ttcgttctgcgccgcaccgacagggcgcagcgcgaacgtgaccgcagctacgcacggatc
gttgcctcgggcgtcaattcggccggccgcacaaacggcatttcgctgccctcccgcgag
gcgcaggccaatcttctgaagatgatctacgaaggcaacggcatcgacgccaatcaggtc
gccttcgtggagggccatggtaccggcaccaaggtgggggacccggcggaggtatggtcc
atcggtacggtgatcggcgccaagcgccgggctccggtgccgatcggctcgataaagtcg
aatatcggccacaccgagccggcctccggcctgttcgggatgatgaaggcggttctggcc
ctcgagaacaactacctgccggcctcgctgcatttcgagacaccgaacgagcagatcgac
ttcgatggcctcaatgtccgcgtgaccgccaacccgatcgagcttctgaagggcaagcgg
gcacggctcgccggcatcaattccttcggtttcggcggcgccaatgcccatgtcgtcatc
agcgatccggatccggctcagggagaaaaggccacgacctcgccggcgggccacgtgttc
ctcgcaagcgcccacacagtatcgagcctcgaaaacctgctcagagactataaagccgcc
ttcgcgcacgcgaacaaggaggagatgcgggccatcgtcgccgcctccggcgccaatcgg
acgcatttgcgccatcggtttgcggtccgcagcgaccatcccgaggatatcgtccgggcg
attgccaaccacctcgaaaagcccggatccgatatcggcgagacgggtgaagcggcggcg
aaggacgcaaaggtcgccttcgtcttttcaggcaacggctcgcaatgggcaggcatgggc
atcgaggcgttccgcgagaacctgcatttccgtcaatcgttcacctcggtcagcgccctc
ttccggttccattcggatgtcgtcctcaccgaccttctgaccgaccccgaactcgacggg
aagctcgcggatacgaaagtcgcccaaccactgctgttcgcgatccaggccgcgctctcc
gactcgctcgtggcgatgggcatcaagccgacggccgtgttcggtcactcggttggcgag
atcgcggctgcctatgcggcgggggcgctgtcgctcgtcgacgcagtgtcgatcgtcgcc
aagcgatcgctgcaccaggaccttctggcaggccagggcacgatggccgccgtgatgttc
ggcgcagaggcagccaaggcctttgcggcggagcgcgggctcgaggatatctgcgtcgca
gcgatcaacgcccataattcggtaacgatttccggtccggcggacgagatctcggcttac
cgggacgcggcccgcaaggcgaaaatcccggttcaaatcctcgacatcaactatccgttc
caccatccgatcatcgatcgggcgaaagaggcgttcctctccgacatcccggacatcgcc
ccccgccggacagaactgacctatctctcgaccgtcaccggtgccgcgctcgacgggacc
gagctcgatcccgactactggtggaagaacgttcgcgagccggtccgtttccaggccgcc
gccgaggccgcgctcgaactcggctgcaggctgttcatcgagatctcgccgcgaccgatc
ctcggatcctacgtcaaggagacgatcaagcaggcggccgtgccggcattggtcgtaccg
acattgctgcgcgacgccggcggcagcggccacgacccgatttcggcatccatggcgcgc
gccgtcgctcatggcgccgccgtcgaccggtcacgcgtctacggcaagcggaatgcattc
gtcgaactgcccgccctgcccttcgagcccgtggaactgcgaccggccaccacgaccgat
gcaacggatctcttcggacgctccgcaaagccctaccgcctcaacggctggcgtggcgac
cccaatgcgggcagctggaagaaccacgtcgacgcgcatctgtttccggatctcgccgaa
cacgtggtcgatggcaaggccattctgccgggcagcggtttcatcgaaatcgccgtctcc
gccgcacagcaatatcacggcagcgacgaggtcgagatcaccaatctggagatcgttcgc
ccgctggaactcagcgacagccgtatcatggagctctcgaccatcctgtcgcccgagacc
ggagacatagaaatccgctcgcgcgagcgcctctcggaagacgattggaccgtgcatgcc
gtcgcccgaagccgcaaacctctgccggcgacgcgcaacgagtgtccgtccaccaagggt
ctggcgaggacggcgagcgtttctgcagccaaagcctatggaaccgcgaagcaattcggt
ctggactacggaccgcgtttccagcttctctccaaagcggtcgcctatggagaccggctc
atcgaggtcgagctgaagcaacctcaggcatcggggcacccccacctcacctatgcgctt
catccgatctcggtcgatgcgacctttcacggactggtcgcgctcttcgaccgcttcacc
ggcgacaggggcggcgcgccctacattcctgtccgcttcggctcggtacgcgtcgtcaat
gccggccggcggatcgcccgcgcgatgatcgagatagagagggtcagcgccaattcgatc
aaggcgaagttccatttcttcgacgagaccggcgccgcgatcgcgcatttcgaggattgc
cgcttccgccgtacctatctgcgcaagcacaagacgctggaaggtctttccttccactat
gaagccgtgctttccgacgtgctcgtgcccggcatgaaacgcgcagccgccatgcctgcg
aagctggttgagccaatcgacaacgatggcctcgacaatgcgaccctgctcttcaacgcc
gccatatatcgcgcctgtcaggagatcgccctgaagctcggcaaggggacagccacggtt
cgcagtgacgcgctgcccggggacctcgatttccaatgcttcctgacgagctgcctcctg
acgctcgaggatgcgggactctgcgagcaccagaacggcacctggaaggtcgcccccgag
ttcatgcttccgaccgtgccggagatccttggcgaactttacggcgatcgccccgatcgt
gccgtagaagcggtcctcgtcaacaacgcctatacggaagcactcagccgtctcgatgcg
ctgcttgcgccggcaccggccggtgacgcgtcggcttctttcaatgccgctttcatgagc
gaagcgacgctcgaccatcaggccgtgcattccgcggcgagccgatcgcgcatggaccac
gttcttcatacgcttgcaggcgctctcgctgcccaacctgccgggtcccgtctgcggctt
atcgaactcggcagcgtctctgccggcttcagccgccggttggccgatctcgcggcccgc
catggtgcggcgctttccattttcgagccgcgcgacaatgcacagcgcaacctcgaaatc
gccttcgaggaggatgcgcatgtgcgcgtgctcaagaagagcgaattcgccgatatcggc
tcgttcgacctcgccgtcagcgcttcggataatctctaccatctgatcgaagaggggagc
ggggtgcgatcggcccttcgctccatgcttcccggaagcggcctcattgcggccgtcagt
gccccttccatcttcgccgacttcgccctgggtctctcgggcggatggttcgagcgcagc
caggcggcggagttccctatcggcaagatcgcggcggtaccgcattggcagaaatgcctt
gaagacctggaccttggcgacgttgtcgtgacggatcgcgaatgccctcatggcagcacc
atcctgatcgaagcccgcggcacagcagccgcaagcgtcggtgaagtgccgggcggcggc
gcggcgccatatctgctgatagagcccgcaacgcagaagattttggccgccggtaagggg
gctaaccacgtccgtgtgaccggcgacattgccgcagatcttgcgaccctgcgcgacgcc
cttgcagcccttggcgacaggccggtccgcgcgatcttcatgtccgaggcggaccgcgcc
gcagatgaggattctgccctgctgcagtcccgcgtgctggcgctcagcgccttcgccgag
gcactgaaacagcacctggccggtgcagaacccgatggcgacgaccggccgcgcctcgtg
ctcgtggccccgggcggcgctccggtcaaggcgtcggcaagctgcggattgaattccgga
ttgtgggcgtttgcccgggttctgcagaacgaatatgagttcatcgatatccatacgctc
gatcttgccggcgatgccgatatcggccgcaaggatattctctccttggcgatccccctg
ctgacggtttcgggattgaaccgggaatggctgtttgaccggaagacgggcctgctttcc
gagctccgggcggttcccggcgctacgaacaaggctgatggtaaaacgaccgccttcacg
gccgcgaccattcgccagcgtgtcagctctcagatcgcaagcatcgcctgggaagagacg
aacataccggagccgggtcgcggtgaagtcctcgttgccgtcgcggcgaccggcctgaat
ttccgcgacgtaatgtgggccatgggtctgctgcccgaagaggcgttggaggatggcttt
gccggagcgacgatcggcatggaactctccggccatgtggtcgcggttggcgaagaggtc
gacgacctcgccgtcggcgatgcggtgatggcgatcgcctcctccgcgttctcgacacat
gcgattgtcgctcgcgccggcattgccaagttgccgcgcgccatgaacccggtggccgcg
gccaccctaccggtcgccttccttaccgcctattatgccattgtcgaactcggccgcatt
caggccggggaaacgatcctgatccacggtgctgccggcggcgtcggtctcgccgcgctt
caggtcgctaagttgaagggagccaaggtcatcgccacggcgggaacgcgcgaaaaacgg
cgcttcctgacgatgctcggggccgactacgtcttcgactctcgttcgctcggcttcgtc
aacgatgtccgttcggtcaccggcggcgaaggcgtggacctcgtgctcaactcacttttt
gccgaggcgatggagcagagcctctcgctggtgaaacctttcggccggttcctggagctt
ggcaagcgcgactactacgccgatagcaagatcgggctgaggccattccgccgcaatgtc
agctatttcggtatcgatgccgaccagctgctcgtgaaggctccggatctgacgaaacgc
atcttcatggagattggagcgctgttcgaggaaggcaagcttacgccgcttccctaccgc
gccttcgattacgatgaaatcggcaacgctttccggctgatgcagaatgccggacacatt
ggcaagatcgtcgtgctgccgcccgtggccggaaggcacgaggtaatgaagaagcctgag
agagacatgaaggtcgatccgcacggcatccatctcgtcgtgggcggcatcggcggcttc
ggcctcgtcaccgccaactggctcgtagaaagaggtgcgcgccggattgcgctgtgctcc
cgccgcggtctgccggatgcggaaacgcgcgccatgatcgaacgctggcagaacgacggc
gtcgtcgcatcggttcacgcttgcgacatcacggatcccgcggccgtggagacgcttctg
gatgcgcttcgttccgaagcgccgcttcgctccgtcattcatgcggcgatggtgctcgac
gacgcgctgatcagcaatctcaatcgcgagcgcaaccgcccggtcatcgacacaaaggcc
aagggagcggccattctcgatcgtctcacccgtggcgacaggctcgacaacttcatcctg
ttctcgtcggcaacgacgctggtcggcaatccgggccaggcgaattacgtcgccgccaac
ggctatctcgagggccttgcccgcgcacggcgccaagagggccttgcgggccttgccgtg
ggcttcggcgcgatcgccgatgccggctacctcacgcagaacgccgaagtcaacgacctg
cttgccaagcgaatcggtaaaacggcgttgaaggctcagctggcactcgacatggtcgaa
agccatattgccgcggatccgggcactgtcgacgcggccgtcgtgatgatctcggagatc
gactggacggctgcccgcaatttgccggtcgcccgcaacgcgctcttcgaggtaatcctg
cgaagcgccgatcagcatgccgccggcgccgagggcacgaagatggatctcgtcgcaatg
atcgaaggcaagtcgccacaggaggccgaggacatcctcttcgatctggtggccggcgag
atcgctgccatcctgcgcgtgtcgaaggatacggtcacgcgcggaaagatcttgaaagag
atcggcctggacagcctcatggccgtggaactgggcatgagtttccagcagaacaccggc
ttcgacatgccgttgagcggcgtcgctgataacacgacggtcggcgatatcgcacgcaag
ctgcatgaaaaggtaagcaagcgcgaccagagcaatgagggcgaggccggagacgacaag
atcgtaacagcgctcacgcagcgtcatgtcggcgcggccaaggaaaaagcactgacccaa
tga
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