Sinorhizobium medicae: Smed_0343
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Entry
Smed_0343 CDS
T00555
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02010
ABC transporters
smd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Smed_0343
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Smed_0343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_0343
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Smed_0343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ABR59201
UniProt:
A6U6C1
LinkDB
All DBs
Position
complement(370334..371293)
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AA seq
319 aa
AA seq
DB search
MTKAIARLSILLAATAISATAASASDDISVSLVLGQRNSGFHEAIACGARAAAKELGVKV
NIQAAPTYSASEQIPVLNAVMATSPSAIVLDPTSSTALIAPLMEAAANGAKIVAVDTTLD
DPSVLSAVVGTDNESVGRETAKALAKALDGKSGKVAQINSIPGISTVDARIKGFEEEIKK
YPNLTYIGNQFASEDIPKAQQAYVSLMSANPDLIGVVSQSNNPAIGVAGGIRSTETAESV
VAIAVDADEAEIEALNEGLLDALVIQQPYEMGYVGFKQAVAAVKGEPVETPIGTGTVTAT
KANIADPDVAKYLYEGNCI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggctattgcgagactttctatcctgcttgccgccacggcgatttcggcaacc
gccgcctcggcctcggacgatatcagcgtgtcgcttgtgctcggccagcgcaatagcggg
tttcatgaggcgatcgcctgcggcgcccgcgccgccgccaaggaactgggcgtgaaggtc
aacatccaggccgcaccgacctactcggcctccgagcagatcccggtgctgaacgccgtc
atggcgacgagcccttctgccatcgtgctcgatccgacgagctcgaccgcgctgatcgcg
ccactgatggaggcagccgccaacggcgccaagatcgtcgccgtcgacaccacgctcgac
gacccgtcggtgctctccgccgtggtcggaaccgacaatgaaagcgtcggccgcgaaacc
gccaaggcgctcgcgaaggcactcgacggaaagtccggcaaggtggcgcagatcaacagc
attcccggcatttccaccgtcgatgcccggatcaagggtttcgaagaagagatcaagaag
tatccgaatctcacctatatcggcaaccagtttgcaagtgaggatatcccgaaggcacag
caggcctacgtgtcgctcatgagcgccaaccccgacctcatcggcgtcgtctcccaatcg
aacaatcccgcgatcggcgttgccggcggcatccgttccaccgagacggccgagagcgtc
gtcgctattgcggtggatgccgatgaagccgagatcgaggctctgaatgaggggctgctc
gacgctctcgtcatccagcagccctacgaaatgggctatgtcggcttcaagcaggccgtc
gctgccgtcaagggcgagcccgtcgagacgccgatcggcaccggcacggtaaccgcgacc
aaggcgaatattgccgacccggacgtggccaaatacctttacgaagggaattgcatctga
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