Sinorhizobium medicae: Smed_0388
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Entry
Smed_0388 CDS
T00555
Name
(GenBank) protein of unknown function DUF558
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smd03009
]
Smed_0388
Enzymes [BR:
smd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
Smed_0388
Ribosome biogenesis [BR:
smd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Smed_0388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
ABR59245
UniProt:
A6U6G5
LinkDB
All DBs
Position
complement(416148..416885)
Genome browser
AA seq
245 aa
AA seq
DB search
MRANFRMQRLFVESPLHNGASHQATREQFNYLINVLRLGEGSSLLVFNGRDGEWRAEISM
PSRKQAVLVAVEQTRPQPAPCDLVYLFAPLKTGRLDYLVQKAVEMGAGVLQPVITQHVQG
KIGSLERIRANAIEAAEQCGVLGIPAVEEPRRLEDLLAAWPRDRRIVFCDEGNESQNPLP
ILNELAEHRLALLIGPEGGFSETERDLLRSLDFVTAIPLGPRILRADTAAVAAMAVIQAT
LGDWR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccaatttccgcatgcagcgtctcttcgtcgaaagcccactgcacaatggggcg
agccaccaggcaacgcgggagcagtttaactatctgatcaacgtgctgcgcttgggcgag
ggctcgtcacttctggtgttcaacggccgggatggcgaatggcgggcggaaatctccatg
ccgtcccgcaagcaggcggtcctcgtcgccgtcgaacagacgcgaccgcagcctgcccct
tgcgatctcgtctatctgtttgcacccctgaagacagggcggctcgattatctcgtgcag
aaggcggtggagatgggtgccggcgtcctgcaacctgtcataacgcagcatgtacagggg
aagatcggcagcctcgaacgcattcgcgccaatgccatcgaagcggccgagcagtgcggc
gtcctcggcatcccggctgtcgaggagccgcgtaggctcgaagaccttcttgcggcctgg
ccgcgcgaccggcgcatcgtgttttgtgacgagggaaacgagagtcagaatcccttgcct
atcctcaacgaattagccgagcaccggctggcacttctgatcggcccggagggcggtttt
tccgagacggagcgagatcttctgcgaagcctcgacttcgtgacggcaatccctctcggg
ccgcgcatcctgcgcgccgacacggcggccgtggcagcaatggccgtcattcaggctacg
ctcggggactggcgttga
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integrated database retrieval system
