Sinorhizobium medicae: Smed_0403
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Entry
Smed_0403 CDS
T00555
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Smed_0403
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smd01007
]
Smed_0403
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smd03016
]
Smed_0403
Enzymes [BR:
smd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
Smed_0403
Amino acid related enzymes [BR:
smd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Smed_0403
Transfer RNA biogenesis [BR:
smd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Smed_0403
Prokaryotic type
Smed_0403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
Molydop_binding
DUF6960
Motif
Other DBs
NCBI-ProteinID:
ABR59260
UniProt:
A6U6I0
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All DBs
Position
432749..434272
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AA seq
507 aa
AA seq
DB search
MLSMNEKQKKTQKLRARLPRGFVDRPAADIRAVDEMVSKIREVYERYGFDPVETPLFEYT
DALGKFLPDSDRPNEGVFSLTDDDDQWLSLRYDLTAPLARHVAENFNEIQLPYRTYRAGY
VFRNEKPGPGRFRQFMQFDADTVGAAGVQADAEMCMMMADTMEALGIARGDYVIRVNNRK
VLDGVLEAIGLGGGEQMNTRLTVLRAIDKLDKFGPEGVRLLLGEGRKDESGDFTKGAGLD
DEQIGKILFFVGITDYAESADALAALVAGTARGAEGVNELNTIRSLVLSAGYEADRIKID
PSVVRGLEYYTGPVFEAELQFAVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFS
IGVSRLMTALKNLGKLGVEQVTAPVVVCVMDRDIESMGRYQRFVQDLRHAGIRAEMYQGN
KKNFGDQLKYADRRGSPIAVIQGGDERASGVVQIKDLIEGKRLSGEIEDNVAWREARAAQ
ISVPEGELVVKIREILADQAEDRKRAG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgctttccatgaatgaaaaacagaagaaaacgcagaagctcagggcgcgcttgccgcgt
ggtttcgtagatcgtccggccgcggacatccgcgccgtggacgagatggtttcgaagatc
cgcgaggtctatgaacgctacggcttcgatccggtggaaaccccgctttttgaatatact
gacgcgctcggaaaattcctgccggacagcgaccggccgaatgaaggcgtcttctcgctc
accgacgacgacgaccagtggcttagtcttcgctacgacctgacggcgccgctggcgcgc
cacgtggccgagaatttcaacgagatccagcttccctaccggacctatcgcgccggctac
gtcttccgcaacgagaagccggggccgggccgtttccgccagttcatgcagttcgatgcc
gatacggtgggtgccgccggcgtgcaggccgatgccgaaatgtgcatgatgatggccgac
acgatggaggcgctcggcattgcccgcggcgactacgtgatccgcgtcaacaaccgcaag
gttctcgacggcgttctggaggcgataggtctcggcggcggcgagcagatgaatacgcgc
ctgacggtgctgcgtgccatcgacaagctcgacaaattcggcccggaaggcgtgcggctg
ttgctgggcgaaggacgcaaggacgagagcggcgacttcaccaagggcgccgggctcgac
gatgagcagatcggcaagatcctgttctttgtcggcatcaccgactatgccgagagcgcg
gacgcgttggcggcactcgtcgccgggacggcccggggcgccgagggcgtcaatgagttg
aacacgatccgcagccttgtgctcagcgccggctacgaggcggaccgcatcaagatcgac
ccctcggtcgtgcgtggtctggaatattatacgggtcccgttttcgaggcggagttgcag
ttcgccgtcaccaacgaaaagggggagaaggtcgtcttcggctccgtcggcggaggcggc
cgctatgacggtctcgtgtcgcgcttcatgggacagccggtgccggcgaccggcttttcg
atcggcgtgtctcggctgatgacggcgctcaagaatctgggcaaactgggcgtagaacag
gtcaccgcgccggtcgtcgtttgcgtcatggaccgcgacatcgaaagcatggggcgctac
cagcgctttgtgcaggatctgcgtcatgccggcatccgcgccgaaatgtaccagggcaac
aagaagaacttcggcgaccagctcaaatatgccgatcgtcgcggttcgccgatcgctgtc
attcagggcggcgacgagcgcgcttccggcgtcgtacagatcaaggacctgatcgaaggc
aagcggctctctggcgaaatcgaagataatgtcgcttggcgcgaggcgcgtgccgctcag
atttccgtcccggaaggcgaactcgtcgttaagattcgcgaaattctcgcggaccaggcc
gaggaccggaaaagggcgggttga
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