Sinorhizobium medicae: Smed_0419
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Entry
Smed_0419 CDS
T00555
Name
(GenBank) porin
KO
K16079
outer membrane immunogenic protein
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_0419
Transporters [BR:
smd02000
]
Other transporters
Pores ion channels [TC:
1
]
Smed_0419
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OMP_b-brl
Autotransporter
OmpA_membrane
Porin_2
Motif
Other DBs
NCBI-ProteinID:
ABR59276
UniProt:
A6U6J6
LinkDB
All DBs
Position
complement(451719..452396)
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AA seq
225 aa
AA seq
DB search
MKRYFLSAAFLAGALSPVVAADLAPVESPPAISAPAAFDWNGFYLGGNVGGGRADVDWTY
QPFGETAHHDGKGFLGGVQAGYNWQIDGFVIGAEADFLGSSIDGDTPCPNPAYSCTSDTK
WLSTVRARAGYSFDNLLVYATGGLGIGRFEIKTDDGAGTSGSTIRNDTGWVAGAGVEYGF
SPNWSIKAEYMHHDFGERTYTVDGGNPVDADFRFDTGKIGVNYRF
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatatttcttaagtgcggcatttcttgctggagcactttcacctgtcgtggcc
gccgatcttgcgccggtcgagtcgccgccggccatatccgcgccggcagcgttcgactgg
aacggcttttatctcggcggtaacgtaggcggcggccgtgcggatgtggattggacgtat
cagcctttcggcgagacggcccatcacgacggtaagggatttctcggcggcgttcaggcg
ggctataactggcagatcgacggcttcgtcatcggtgcagaagcggactttctgggttcc
agcatcgatggagacacgccctgccctaatccggcttactcatgcacgagcgatacgaaa
tggctgtccaccgtccgcgcccgcgcaggctacagcttcgataacctgcttgtctacgcg
actggcggattgggaataggccgcttcgagataaaaacggatgacggagccggtacaagc
ggtagcaccatacgcaacgacaccggctgggtcgccggcgctggcgtcgaatacggcttc
tcgccgaactggtcgatcaaggccgagtatatgcaccatgatttcggcgagcgaacctat
acagtcgatggcggcaatcctgtcgatgccgacttccgcttcgatacgggcaagattggc
gtaaactaccgcttctga
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