Sinorhizobium medicae: Smed_0578
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Entry
Smed_0578 CDS
T00555
Name
(GenBank) protein of unknown function DUF853 NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smd03400
]
Smed_0578
DNA repair and recombination proteins [BR:
smd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Smed_0578
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
ResIII
FtsK_SpoIIIE
AAA_10
Hydrolase
AAA_30
T2SSE
TrwB_AAD_bind
nSTAND3
DUF5852
AAA_7
Zot
AAA_19
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABR59434
UniProt:
A6U704
LinkDB
All DBs
Position
complement(627547..629109)
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AA seq
520 aa
AA seq
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MLQEGKIYIGTSRKPDDSINKGEYLELKFGNRHGLITGATGTGKTVTLQILAEGFSNAGV
PVFCADVKGDLSGIGAMGESKDFLLKRAEQIGLEPYDFQEFPVIFWDLYGEKGHRVRTTI
SEMGPLLLSRLMNASDAQEGVLNIAFKIADEGGLPLLDLKDLRALLNYMGENAGELSNQF
GFISKASVGSIQRELLILEQQGAEHFFGEPALKITDIMRTTNDGRGAISVLAADKLMMNP
RLYATFLLWLLSELFEELPEVGDPDKPKLVFFFDEAHLLFNDAPKVLVERVEQVVRLIRS
KGVGVYFVTQNPLDVPEAVLAQLGNRVQHALRAYSPREQKAVKTAADTFRPNPDFNCADV
ITNLGTGEALVSTLEGKGSPSIVERTLVRPPASRLGPLTEAERQHVISLSPVRGLYDEDF
DRESAYEMLAKRAAKAAEQAEAAQRAEERASEETSGGGRWTLPGFGDDAAEAPSGKRART
RSSGYQRETIVEAAMKSVARTVATQVGRALVRGILGSLKR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggaaggcaagatctacatcggaaccagccgcaagccggacgattcgatcaat
aaaggcgaatatctggagctcaaattcggcaatcgccacggtctgatcacaggcgcgacc
gggaccggcaagaccgtgacgctgcaaatcctggccgagggtttctcgaatgccggcgta
ccggtattctgcgccgacgtgaagggcgacctatccggcatcggcgcgatgggcgagtcg
aaggacttcctgctcaagcgcgcggagcagatcggcctcgagccttatgattttcaggaa
tttccggtgatcttctgggatctctacggcgagaaggggcacagggtccggaccaccata
tcggagatggggcccctccttctgtcgcggctgatgaacgcgtccgacgcccaggaaggt
gtgttgaacatcgccttcaagatcgccgatgagggcggattgccgctactcgacctcaag
gacctgcgggcgctgctcaattacatgggcgagaatgcaggcgagctatccaatcagttc
ggcttcatctccaaagcctccgtcggctcgatccagcgtgaactcctgatcctggaacag
cagggggcggagcatttctttggtgagccggcactgaagatcaccgacatcatgcggacc
accaatgacgggcgcggcgcgatttcggttcttgccgccgacaagctgatgatgaacccg
cggctctacgcaaccttcctgttatggctcctgtcagagcttttcgaggaacttcccgaa
gtgggtgacccggataagccgaagctggtgttcttcttcgacgaagcgcatttgctcttc
aatgatgcgcccaaggtcctcgtcgaacgcgtcgagcaggttgtccgcctgatccgctcg
aagggcgttggcgtctatttcgtcacccagaacccgctcgacgtcccggaggcggtcctc
gcccagcttggaaaccgtgtccagcatgcgttgcgcgcctattccccccgcgaacagaag
gcagtcaagacggctgccgatacgttccgccccaaccccgacttcaattgcgccgacgtg
atcaccaatctcggtaccggcgaggctctggtttcgacgctggagggcaaaggctcgccg
tcgattgtcgagcggaccctggtgcgtccgccggcgtcccggctcggtccgcttaccgag
gccgagcggcagcatgtcatcagcctcagccccgtgcgcggcctctacgatgaggacttc
gaccgggagtcggcctatgaaatgcttgccaagcgtgcggccaaggctgcggaacaggcg
gaagcagctcagcgagcagaagaacgggcctctgaggagacttccggcggcggccgttgg
acactgcccggcttcggcgacgacgcggcggaagcgccgtcgggcaagcgggctaggacg
cgctcttccggctaccaacgggaaaccatcgtggaggcggcgatgaagtccgtcgcgcgg
acggtcgcgacccaggtgggacgggctcttgtccgcggcattctcggcagtctgaagcgt
tag
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