Sinorhizobium medicae: Smed_0689
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Entry
Smed_0689 CDS
T00555
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00053
Ascorbate and aldarate metabolism
smd00520
Amino sugar and nucleotide sugar metabolism
smd01100
Metabolic pathways
smd01240
Biosynthesis of cofactors
smd01250
Biosynthesis of nucleotide sugars
Module
smd_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
Smed_0689
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
Smed_0689
Enzymes [BR:
smd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
Smed_0689
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
ABR59545
UniProt:
A6U7B5
LinkDB
All DBs
Position
complement(742955..743980)
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AA seq
341 aa
AA seq
DB search
MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVRA
MLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDSNLVGSWNMLELAKAIAPK
HLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAHLYEVPTTAFRFF
TVYGPWGRPDMALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLVESIVRLSHIAPAEEN
RVAPEKATDTLSRHAPFRVVNTGGGQPVELMTFVETVEKAVGRPAIHNMLPMQQGDVPRT
FASPDLLEALTGFKPSVSVEEGVARFVEWYEQNYRRAQTIV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacctcatcaccggcactgcgggtttcatcggttttcatgttgcgaagcggctg
atcgacgaggggcacttcgtcgtcggatttgacggcatgacgccctactacgatgtgacg
ctgaaggaacgtcgccacgcgatcctgcagcgctccaacggcttcaaggccgtgagggcc
atgctggaggaccgggccgcactcgaccgggcagccgagctcgccgaaccggaagtcatc
atccacctcgccgcccaggcgggcgtccgctacagcctcgaaaatcccaaggcctatgtc
gattcgaacctcgtcgggtcgtggaatatgctcgagctcgcaaaagcaatcgcgcccaag
cacctgatgctcgcctccacttcgtcgatctacggcgccaatgagaagattccgtttgcc
gaggccgatcgggccgacgagccaatgacgctttatgccgccacgaagaaatcaatggag
ctcatggcacacagctatgcgcatctctacgaggttccgaccaccgccttccgttttttc
accgtttacggaccctggggacgaccggacatggcgctcttcaagttcgtcgatgccatc
cacaacggccggccgatcgacatttatggcgaaggacggatgagccgggacttcacctat
atagatgacctcgtcgagagcatcgtccggctgtcgcatattgcgcccgcggaggagaac
cgggtggcaccggaaaaagccaccgacacgctttcccgtcatgcgccattccgcgtcgtc
aacaccggcggcggacagccggtggagctcatgaccttcgtggaaacggtcgagaaggcg
gtggggcgtccggcgattcacaacatgctgccgatgcaacagggcgatgtaccgcgcact
tttgcctccccggacctgcttgaagccttgaccgggttcaagccgtccgtttcggtcgag
gaaggcgtcgcgcgcttcgtcgaatggtatgaacagaattatcgtcgtgcacagacgatt
gtctga
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