Sinorhizobium medicae: Smed_0916
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Entry
Smed_0916 CDS
T00555
Name
(GenBank) putative periplasmic binding ABC transporter protein
KO
K10439
ribose transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02010
ABC transporters
smd02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Smed_0916
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Smed_0916
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_0916
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Smed_0916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
ABR59771
UniProt:
A6U7Z1
LinkDB
All DBs
Position
complement(987231..988253)
Genome browser
AA seq
340 aa
AA seq
DB search
MNKKLSSGAGSAGVGRRLFLKSAAIGGAAAAGGLAAPAIAQGAKRKVIFVAHEDIPFFSP
VRAGFKEFGKLRNWDTQFLARGTPANVAATVRLQVDALNSRPDAVGFTRINETAFDENIM
RAKDAGIPIVLYNVASDGYEKLEVPFVGQDFIPAGRVNGLQAAMYAHQLTGKTEGTILID
NPSPGVSALEERATGTEQGIDEYNGKNGTNYKYETFTTANSQTEALSRIDAKMRATPDVV
GFASTVSGNWFAAIWAEDNGMTGKFANGGFDLIPGVLEAIAAETSHWAVGQNPYAQGWVT
SSLLDMQLEAGYQPFDYDTGAEVVDKSNVEAVTKREARFG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaactatcttcaggggcgggatcggccggtgtcggcaggcgtcttttcttg
aaatccgcagcaatcggcggcgctgccgcagccggcggacttgcagctccggcgatcgct
cagggcgctaaacggaaggtgatctttgtcgcccatgaggacatccccttcttttccccg
gttcgtgccgggttcaaggaattcggcaagctgcgaaactgggacacgcagtttctcgcc
cgtggcacaccggccaacgtcgccgcaaccgtgcggttgcaagtggatgcgctgaactcc
aggccggacgcggtcggctttacccgcatcaatgaaaccgctttcgatgagaatatcatg
cgggcaaaggacgccggcattccgatcgtgctctacaacgtggcaagcgacggctacgaa
aagctcgaagtgcctttcgtcggtcaggacttcattcccgccggccgcgtgaacggcctt
caggcggccatgtacgcgcatcaactgaccggcaagaccgaaggcacgatcctgatcgac
aatccttctcccggcgtcagcgcgctggaagaacgggcgaccggcacggagcaggggatc
gacgaatacaacgggaagaacggcaccaactacaagtacgagacatttaccaccgcaaac
tcgcagaccgaagcgctgtcgcggatcgatgccaagatgcgcgcgacgccggacgtggtc
ggtttcgccagcactgtttccggaaactggttcgcagcaatctgggccgaagataacgga
atgaccggcaagttcgccaatgggggcttcgaccttatccccggcgttctggaggcgatc
gcggcagaaacgtcccactgggcggtcggacagaacccctatgctcagggctgggtcacc
tcgtcactgctggatatgcagcttgaggccggataccagccattcgattacgataccggc
gcggaagtcgtcgacaaatccaacgtcgaggccgtgaccaagcgcgaagcgcgtttcggg
tga
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