Sinorhizobium medicae: Smed_1108
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Entry
Smed_1108 CDS
T00555
Name
(GenBank) cationic amino acid ABC transporter, periplasmic binding protein
KO
K09969
general L-amino acid transport system substrate-binding protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Smed_1108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_1108
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
General L-amino acid transporter
Smed_1108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ABR59959
UniProt:
A6U8H9
LinkDB
All DBs
Position
complement(1178288..1179313)
Genome browser
AA seq
341 aa
AA seq
DB search
MARTILTALVSAAVMGVGSYAASAATLDDVKAKGFVQCGVNTGLAGFAAPNASGDWSGFD
VDYCKAIAAAVFGDATKVKYTPLSAKERFPALQSGEVDVLARNTTWSINRDTALGFNFRP
VNYYDGQGFMVRKELDVKSALELSGAAVCVQTGTTTELNLADYFKANNLQYNPVVFEKLE
EVNAAYDAGRCDVYTTDQSGLYSLRLTLSKPDDHIVLPEIISKEPLAPAVRQGDDQWFDI
VSWVHYALVQAEEFGVTQANVEEMKKSANPDVQRFLGVEADSKIGTDLGLTNEWAVNIVK
AVGNYGEVFDRNIGAGSPLKIERGLNALWNKGGLQYAPPVR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaacaattctgacagctctcgtaagcgccgctgtcatgggggtaggctcatat
gcggcatcggccgcgacacttgacgacgtgaaggcaaagggattcgtccaatgcggcgtg
aatacgggtctcgccggtttcgcggcccctaacgcttcgggcgattggagcggtttcgac
gtcgactactgcaaggcgattgccgctgctgtcttcggcgacgcaaccaaggtgaagtac
acgccgctgtcggcgaaggaacgctttccggctctccagtccggcgaagtcgacgtgctc
gcacgcaatacgacctggtcgatcaaccgtgacacggctctcggcttcaatttccgtccg
gtcaactattatgacggtcaaggcttcatggttcgcaaggaactcgatgtgaagtctgcc
ctcgaactttcgggcgctgccgtctgcgtacagacaggcaccacgaccgaactcaacctc
gccgactacttcaaggcgaacaatctgcagtacaatccggtcgtcttcgaaaagctggaa
gaagtgaatgctgcctacgacgccggccgctgcgacgtctatacaaccgaccagtccggc
ctttattcgctgcgcctcacgctctctaagcccgacgatcacatcgtgctgccggagatt
atctcgaaagagcctctcgcacctgcagtccgacaaggcgacgatcagtggttcgacatc
gtcagttgggtccattacgccctggtccaggccgaagaattcggcgtcacccaggccaat
gtcgaagaaatgaagaagtcggcgaaccctgatgttcagcgctttctgggcgtcgaagcc
gacagcaagatcggcaccgacctcggcctgaccaacgaatgggccgtcaacatcgtcaag
gcggtcggcaattacggcgaagtgttcgatcgcaacatcggcgccggcagcccgctgaag
atcgagcgaggcctcaacgccctctggaacaagggcggtctgcaatacgccccgccggtc
cgctaa
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